| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1326995 = | 25 (0.340) | 5 (0.070) | 5/238 | NT | 15.4% | noncoding (1487/1522 nt) | PP_16SE | 16S ribosomal RNA |
| ? | NC_002947 | 1327017 = | 31 (0.440) | noncoding (1509/1522 nt) | PP_16SE | 16S ribosomal RNA | |||||
AGCCAGAAATCAACATTCGATGCGAATGCTCATTTCCAGGTTCTGACCAGGAAAAACGTCTTCGACAATGAATCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGCAGGTTCCCCTACGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1327148‑1326995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTT > NC_002947/1327017‑1327165 AGCCAGAAATCAACATTCGATGCGAATGCTCATTTCCAGGTTCTGACCAGGAAAAACGTCTTCGACAATGAATCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGCAGGTTCCCCTAC < 1:1042223/150‑1AGCCAGAAATCAACATTCGATACGAATGCTCATTTCCAGGTTCTGACCAGGAAAAACGTCTTCGACAATGAATCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGCAGGTTCCCCTAC < 1:1729834/150‑1 CAGAAATCAACATTCGATACGAATGCTCATTTCCAGGTTCTGACCAGGAAAAACGTCTTCGACAATGAATCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGCAGGTTCCCCTACGGC > 2:800875/1‑150 TCTGACCAGGAAAAACGTCTTCGACAATGAATCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGCAGGTTCCCCTACG < 1:1102487/110‑1 TCTGACCAGGAAAAACGTCTTCGACAATGAATCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGCAGGTTCCCCTACG > 2:1102487/1‑110 CAGGAAAAACGTCTTCGACAATGAATCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGCAGGTTCCCCTACGGC < 1:877298/106‑1 CAGGAAAAACGTCTTCGACAATGAATCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGCAGGTTCCCCTACGGC > 2:877298/1‑106 TGAATCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGCAGGTTCCCCTACG > 1:353787/1‑83 TGAATCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGCAGGTTCCCCTACG < 2:353787/83‑1 TCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGAC > 1:22382/1‑102 TCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGAC < 2:22382/102‑1 GATCCAGCCGCAGGTTCCCCTACGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGAC > 1:1934912/1‑102 GATCCAGCCGCAGGTTCCCCTACGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGAC < 2:1934912/102‑1 CAGCCGCAGGTTCCCCTACGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTC > 2:206499/1‑150 GGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTT < 1:791388/150‑1 GGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTC > 2:1636604/1‑142 GGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTC < 1:1636604/142‑1 CTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCT < 2:261903/150‑1 TGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTT < 2:1729834/150‑1 AGCCAGAAATCAACATTCGATGCGAATGCTCATTTCCAGGTTCTGACCAGGAAAAACGTCTTCGACAATGAATCAAGCAATTCGTGTGGGAGCTCATCAGCAGGCTGATGTCGTCGATTAAGGAGGTGATCCAGCCGCAGGTTCCCCTACGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1327148‑1326995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTT > NC_002947/1327017‑1327165 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |