| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1326995 = | 25 (0.340) | 5 (0.070) | 5/238 | NT | 15.4% | noncoding (1487/1522 nt) | PP_16SE | 16S ribosomal RNA |
| ? | NC_002947 | 1327017 = | 31 (0.440) | noncoding (1509/1522 nt) | PP_16SE | 16S ribosomal RNA | |||||
TCAGAATGTCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGCTAGTCTAACCTTCGGGGGGACGGTTACCACGGTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTT > NC_002947/1326846‑1327142 | aagaacgatctgacaaaagccagaaatcaacattcgatacgaatgctcatttccaggttctgaccaggaaaaacgtcttcgacaatgaatcaagcaattcgtgtgggagctcatcagcaggctgatgtcgtcgattaaggaggtgatcca < 2:1729834‑M1/1‑1 (MQ=255) agaacgatctgacaaaagccagaaatcaacattcgatacgaatgctcatttccaggttctgaccaggaaaaacgtcttcgacaatgaatcaagcaattcgtgtgggagctcatcagcaggctgatgtcgtcgattaaggaggtgatccAg < 2:261903‑M1/2‑1 (MQ=255) aacgatctgacaaaagccagaaatcaacattcgatacgaatgctcatttccaggttctgaccaggaaaaacgtcttcgacaatgaatcaagcaattcgtgtgggagctcatcagcaggctgatgtcgtcgattaaggaggtgatccAGcc < 1:791388‑M1/4‑1 (MQ=255) gacaaaagccagaaatcaacattcgatgcgaatgctcatttccaggttctgaccaggaaaaacgtcttcgacaatgaatcaagcaattcgtgtgggagctcatcagcaggctgatgtcgtcgattaaggaggtgatccAGcc > 2:1636604‑M1/139‑142 (MQ=255) gacaaaagccagaaatcaacattcgatgcgaatgctcatttccaggttctgaccaggaaaaacgtcttcgacaatgaatcaagcaattcgtgtgggagctcatcagcaggctgatgtcgtcgattaaggaggtgatccAGcc < 1:1636604‑M1/4‑1 (MQ=255) gaaatcaacattcgatacgaatgctcatttccaggttctgaccaggaaaaacgtcttcgacaatgaatcaagcaattcgtgtgggagctcatcagcaggctgatgtcgtcgattaaggaggtgatccAGCCGTAGGGGAACCTGCGGCTg > 2:206499‑M1/128‑150 (MQ=255) gtcttcgacaatgaatcaagcaattcgtgtgggagctcatcagcaggctgatgtcgtcgattaaggaggtgatccAGCCGTAGGGGAACCTGCGGCTGGATc < 2:1934912‑M1/27‑1 (MQ=255) gtcttcgacaatgaatcaagcaattcgtgtgggagctcatcagcaggctgatgtcgtcgattaaggaggtgatccAGCCGTAGGGGAACCTGCGGCTGGATc > 1:1934912‑M1/76‑102 (MQ=255) gATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTg < 1:873051/150‑1 (MQ=32) aTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTgg < 1:1296234/150‑1 (MQ=32) aTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTgg < 2:1348016/150‑1 (MQ=32) aTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACAAGAGGCTGCTAGACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTgg > 2:1441901/1‑150 (MQ=11) aTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCAGTAGGGGAACCTGCGGCTGGATCACGTCCTTAATAGACGACATCAGCATGTTGATGAGCTCCCACACGAATTGCTTGATTCATTCTCGAAGACGTTTTTCCTGGTCAGAAcgtcg > 2:397053/1‑146 (MQ=11) cATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGaaa < 1:106750/150‑1 (MQ=32) aTGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAAt > 1:1183911/1‑150 (MQ=32) gACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGa < 1:930734/150‑1 (MQ=32) gACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGa < 1:1802158/150‑1 (MQ=32) gtcgattaaggaggtgatccAGCCGCAGGTTCCCCTACGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGa < 2:22382‑M1/82‑1 (MQ=255) gtcgattaaggaggtgatccAGCCGCAGGTTCCCCTACGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGa > 1:22382‑M1/21‑102 (MQ=255) ggTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTc < 1:1772627/150‑1 (MQ=32) gTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTg > 1:1770547/1‑136 (MQ=33) gTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTg < 2:1770547/136‑1 (MQ=32) tGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTg > 1:3303/1‑135 (MQ=33) tGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTg < 2:3303/135‑1 (MQ=32) tGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCgt > 1:261903/1‑149 (MQ=17) gTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCt < 1:1924445/130‑1 (MQ=32) gTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCt > 2:1924445/1‑130 (MQ=32) gTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCCCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCg > 1:654341/1‑150 (MQ=17) tAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCAt > 1:1702562/1‑144 (MQ=32) tAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCAt < 2:1702562/144‑1 (MQ=32) aaCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTAATATACTAATTGCTTGATTCATTGTAGAAGACACTCTTCTGGGATAGAACCTGGAAATGAGCATTCGTATGGAATga > 1:917213/1‑149 (MQ=11) aCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGtt < 2:1161389/150‑1 (MQ=17) aCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGtt < 1:1335717/150‑1 (MQ=17) aCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGtt < 2:661858/150‑1 (MQ=17) aCAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTAGATTCCTTATCGCAGGCGTTGTGGCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGtt > 1:1585392/1‑150 (MQ=11) aaGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGa > 1:697728/1‑150 (MQ=17) ggTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGAtt > 2:1309647/1‑150 (MQ=17) ggTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGAtt > 2:332230/1‑150 (MQ=17) gTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGTATCGAATGTTGAttt > 1:602162/1‑150 (MQ=17) gTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGAttt > 2:749142/1‑150 (MQ=32) | TCAGAATGTCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCACCAGAAGTAGCTAGTCTAACCTTCGGGGGGACGGTTACCACGGTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCTTAATCGACGACATCAGCCTGCTGATGAGCTCCCACACGAATTGCTTGATTCATTGTCGAAGACGTTTTTCCTGGTCAGAACCTGGAAATGAGCATTCGCATCGAATGTTGATTT > NC_002947/1326846‑1327142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |