New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1468301	64 (0.880)	4 (0.060)	3/236	NT	5.9%	coding (398/1479 nt)	algE	alginate production protein AlgE
	?	NC_002947	= 1468324	67 (0.960)					coding (375/1479 nt)	algE	alginate production protein AlgE

GTGCGGTATTCGCTGAATCGCTGGGCGACGCCCAGGTCGGCCTTGAGCAAGGTGGTATCGAAGGTCCAGTTCAGCGCTTCGATGTTGGTATCGCGCCACATGCCATCGTCGCTGCGCAGGCGCTGGCGACCGAAGCGCAGTTGCTCGCCTGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1468148‑1468301 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggtCGGCTACAGCGGCCTTACCGCCTACCCAGGCGAGCAACTGCGCTTC  <  NC_002947/1468324‑1468279                                                                                                                                                                                                          GTGCGGTATTCGCTGAATCGCTGGGCGACGCCCAGGTCGGCCTTGAGCAAGGTGGTATCGAAGGTCCAGTTCAGCGCTTCGATGTTGGTATCGCGCCACATGCCATCGTCGCTGCGCAGGCGCTGGCGACCGAAGCGCAGTTGCTCGCCT                                                    <  2:685683/150‑1    CGGTATTCGCTGAATCGCTGGGCGACGCCCAGGTCGGCCTTGAGCAAGGTGGTATCGAAGGTCCAGTTCAGCGCTTCGATGTTGGTATCGCGCCACATGCCATCGTCGCTGCGCAGGCGCTGGCGACCGAAGCGCAGTTGCTCGCCTGGG                                                 <  2:1048917/150‑1              TGAATCGCTGGGCGACGCCCAGGTCGGCCTTGAGCAAGGTGGTATCGAAGGTCCAGTTCAGCGCTTCGATGTTGGTATCGCGCCACATGCCATCGTCGCTGCGCAGGCGCTGGCGACCGAAGCGCAGTTGCTCGCCTGGG                                                 >  1:1530152/1‑140              TGAATCGCTGGGCGACGCCCAGGTCGGCCTTGAGCAAGGTGGTATCGAAGGTCCAGTTCAGCGCTTCGATGTTGGTATCGCGCCACATGCCATCGTCGCTGCGCAGGCGCTGGCGACCGAAGCGCAGTTGCTCGCCTGGG                                                 <  2:1530152/140‑1                                                               GGTCCAGTTCAGCGCTTCGATGTTGGTATCGCGCCACATGCCATCGTCGCTGCGCAGGCGCTGGCGACCGAAGCGCAGTTGCTCGCCTGGGTCGGCTACAGCGGCCTTACCGCCTACCCAGGCGAGCAACTGCGCTTC  <  1:225827/138‑1                                                               GGTCCAGTTCAGCGCTTCGATGTTGGTATCGCGCCACATGCCATCGTCGCTGCGCAGGCGCTGGCGACCGAAGCGCAGTTGCTCGCCTGGGTCGGCTACAGCGGCCTTACCGCCTACCCAGGCGAGCAACTGCGCTTC  >  2:225827/1‑138                                                                         agtGCTTCGATGTTGGTATCGCGCCACATGCCATCGTCGCTGCGCAGGCGCTGGCGACCGAAGCGCAGTTGCTCGCCTGGGTCGGCTACAGCGGCCTTACCGCCTACCCAGGC                 <  1:1435650/110‑1                                                                         agtGCTTCGATGTTGGTATCGCGCCACATGCCATCGTCGCTGCGCAGGCGCTGGCGACCGAAGCGCAGTTGCTCGCCTGGGTCGGCTACAGCGGCCTTACCGCCTACCCAGGC                 >  2:1435650/4‑113                                                                                                                                                                                                          GTGCGGTATTCGCTGAATCGCTGGGCGACGCCCAGGTCGGCCTTGAGCAAGGTGGTATCGAAGGTCCAGTTCAGCGCTTCGATGTTGGTATCGCGCCACATGCCATCGTCGCTGCGCAGGCGCTGGCGACCGAAGCGCAGTTGCTCGCCTGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1468148‑1468301 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggtCGGCTACAGCGGCCTTACCGCCTACCCAGGCGAGCAACTGCGCTTC  <  NC_002947/1468324‑1468279

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.