| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1603703 = | 59 (0.810) | 4 (0.060) | 4/240 | NT | 6.7% | coding (751/1011 nt) | PP_1406 | hypothetical protein |
| ? | NC_002947 | 1603735 = | 55 (0.780) | coding (719/1011 nt) | PP_1406 | hypothetical protein | |||||
GCAGCGCTGAAAGTGCCGAACTGCTCGATGGGTTTGCCGTGAACATCCCGGGTGAAGTACCGCTTTTCGTCAACGAAGACCGCAGCGATGAAAAACTGCGCGCTATCCGCAACTCGGACTACCTGAGCTGGTGCCTGGGGCAGCTGGCGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1603855‑1603703‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggTAGTCCGAGTTGCGGATAGCGCGCAGTTTTTCATCGCTGCGGTCTTCGTTGACGAAAAGCGGTACTTCACCCGGGATGTTCACGGCAAACCCATCGAGCAGTTCGGCACTTTCAGCGCTGCGCTGGCGGGTGGTGCCGTCGGGCAGCTT > NC_002947/1603735‑1603883 GCAGCGCTGAAAGTGCCGAACTGCTCGATGGGTTTGCCGTGAACATCCCGGGTGAAGTACCGCTTTTCGTCAACGAAGACCGCAGCGATGAAAAACTGCGCGCTATCCGCAACTCGGACTACCTGAGCTGGTGCCTGGGGCAGCTGGCGC > 2:1899927/1‑150 GGTTTGCCGTGAACATCCCGGGTGAAGTACCGCTTTTCGTCAACGAAGACCGCAGCGATGAAAAACTGCGCGCTATCCGCAACTCGGACTACCTGAGCTGGTGCCTGGGGCAGCTGGCGCAG < 1:749405/122‑1 GGTTTGCCGTGAACATCCCGGGTGAAGTACCGCTTTTCGTCAACGAAGACCGCAGCGATGAAAAACTGCGCGCTATCCGCAACTCGGACTACCTGAGCTGGTGCCTGGGGCAGCTGGCGCAG > 2:749405/1‑122 ATCCCGGGTGAAGTACCGCTTTTCGTCAACGAAGACCGCAGCGATGAAAAACTGCGCGCTATCCGCAACTCGGACTACCTGAGCTGGTGCCTGGGGCAGCTGGCGCAG < 1:1366838/108‑1 ATCCCGGGTGAAGTACCGCTTTTCGTCAACGAAGACCGCAGCGATGAAAAACTGCGCGCTATCCGCAACTCGGACTACCTGAGCTGGTGCCTGGGGCAGCTGGCGCAG > 2:1366838/1‑108 CCTGAGCTGGTGCCTGGGGCAGCTGGCGCAGGTAGTCCGAGTTGCGGATAGCGCGCAGTTTTTCATCGCTGCGGTCTTCGTTGACGAAAAGCGGTA > 1:40396/1‑96 CCTGAGCTGGTGCCTGGGGCAGCTGGCGCAGGTAGTCCGAGTTGCGGATAGCGCGCAGTTTTTCATCGCTGCGGTCTTCGTTGACGAAAAGCGGTA < 2:40396/96‑1 TGAGCTGGTGCCTGGGGCAGCTGGCGCAGGTAGTCCGAGTTGCGGATAGCGCGCAGTTTTTCATCGCTGCGGTCTTCGTTGA > 1:1694391/1‑82 TGAGCTGGTGCCTGGGGCAGCTGGCGCAGGTAGTCCGAGTTGCGGATAGCGCGCAGTTTTTCATCGCTGCGGTCTTCGTTGA < 2:1694391/82‑1 GTAGTCCGAGTTGCGGATAGCGCGCAGTTTTTCATCGCTGCGGTCTTCGTTGACGAAAAGCGGTACTTCACCCGGGATGTTCACGGCAAACCCATCGAGCAGTTCGGCACTTTCAGCGCTGCGCTGGCGGGTGGTGCCGTCGGGCAGCTT > 2:1105631/1‑150 GTAGTCCGAGTTGCGGATAGCGCGCAGTTTTTCATCGCTGCGGTCTTCGTTGACGAAAAGCGCTACTTCACCCGGGATGTTCACGGCAAACACATCGAGCATTTCGTCACTTTCAGCGCTGCGCTGGCAGGAGGTGCCGTCGTGCAGCTT > 2:325478/1‑150 GCAGCGCTGAAAGTGCCGAACTGCTCGATGGGTTTGCCGTGAACATCCCGGGTGAAGTACCGCTTTTCGTCAACGAAGACCGCAGCGATGAAAAACTGCGCGCTATCCGCAACTCGGACTACCTGAGCTGGTGCCTGGGGCAGCTGGCGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1603855‑1603703‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggTAGTCCGAGTTGCGGATAGCGCGCAGTTTTTCATCGCTGCGGTCTTCGTTGACGAAAAGCGGTACTTCACCCGGGATGTTCACGGCAAACCCATCGAGCAGTTCGGCACTTTCAGCGCTGCGCTGGCGGGTGGTGCCGTCGGGCAGCTT > NC_002947/1603735‑1603883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |