New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1633955 = | 70 (0.960) | 6 (0.090) | 6/226 | NT | 9.6% | intergenic (+7/‑157) | lepB/rnc | signal peptidase I/ribonuclease 3 |
? | NC_002947 | 1633982 = | 49 (0.740) | intergenic (+34/‑130) | lepB/rnc | signal peptidase I/ribonuclease 3 |
AATCAACATCCTGAAAGACTGTTTGGCTGTGGTCCGCCGATTGATGTGTGGCGAATCTCCCGATCCCTGAGAACACAGCCTATGTCAGAAATGCATTCGGCGCTGTCTGCTGGACAGCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1634077‑1633955 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacagcgccgaATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGAGTGCTTCCCTTGCC > NC_002947/1633982‑1634129 AATCAACATCCTGAAAGACTGTTTGGCTGTGGTCCGCCGATTGATGTGTGGCGAATCTCCCGATCCCTGAGAACACAGCCTATGTCAGAAATGCATTCGGCGCTGTCTGCTGGACAGCGCC > 1:1095268/1‑121 AATCAACATCCTGAAAGACTGTTTGGCTGTGGTCCGCCGATTGATGTGTGGCGAATCTCCCGATCCCTGAGAACACAGCCTATGTCAGAAATGCATTCGGCGCTGTCTGCTGGACAGCGCC < 2:1095268/121‑1 AATCAACATCCTGAAAGACTGTTTGGCTGTGGTCCGCCGATTGATGTGTGGCGAATCTCCCGATCCCTGAGAACACAGCCTATGTCAGAAATGCA‑TCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTC > 1:378181/1‑150 ATCAACATCCTGAAAGACTGTTTGGCTGTGGTCCGCCGATTGATGTGTGGCGAATCTCCCGATCCCTGAGAACACAGCCTATGTCAGAAATGCA‑TCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCA < 2:378181/150‑1 CAACATCCTGAAAGACTGTTTGGCTGTGGTCCGCCGATTGATGTGTGGCGAATCTCCCGATCCCTGAGAACACAGCCTATGTCAGAAATGCATTCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAG < 1:105262/150‑1 TGTTTGGCTGTGGTCCGCCGATTGATGTGTGGCGAATCTCCCGATCCCTGAGAACACAGCCTATGTCAGAAATGCATTCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTC > 1:1906673/1‑132 TGTTTGGCTGTGGTCCGCCGATTGATGTGTGGCGAATCTCCCGATCCCTGAGAACACAGCCTATGTCAGAAATGCATTCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTC < 2:1906673/132‑1 GGCGCTGTCTGCTGGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTG < 2:105262/150‑1 GCTGGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCA > 1:230124/1‑82 GCTGGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCA < 2:230124/82‑1 AGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAAC < 1:947694/109‑1 AGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAAC > 2:947694/1‑109 GCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGAGTGCTTCCCTT > 1:1216460/1‑150 CCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGAGTGCTTCCCTTG < 2:1225204/150‑1 GAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGAGTGCTTCCCTTGCC < 1:1642305/150‑1 AATCAACATCCTGAAAGACTGTTTGGCTGTGGTCCGCCGATTGATGTGTGGCGAATCTCCCGATCCCTGAGAACACAGCCTATGTCAGAAATGCATTCGGCGCTGTCTGCTGGACAGCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1634077‑1633955 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacagcgccgaATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGAGTGCTTCCCTTGCC > NC_002947/1633982‑1634129 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |