New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1633955 =70 (0.960)6 (0.090) 6/226 NT 9.6% intergenic (+7/‑157) lepB/rnc signal peptidase I/ribonuclease 3
?NC_002947 1633982 = 49 (0.740)intergenic (+34/‑130) lepB/rnc signal peptidase I/ribonuclease 3

TGACCCGAACATTCCCAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCG  >  NC_002947/1633807‑1634102
                                                                                                                                                    |                                                                                                                                                    
ggcaagggaagcactcatgcggccacccgatcgttgttcaacgcgttgttcaaatcaacatcctgaaagactgtttggctgtggtccgccgattgatgtgtggcgaatctcccgatccctgagaacacagcctatgtcagaaatgcatTc                                                                                                                                                     <  1:1642305‑M1/2‑1 (MQ=255)
  caagggaagcactcatgcggccacccgatcgttgttcaacgcgttgttcaaatcaacatcctgaaagactgtttggctgtggtccgccgattgatgtgtggcgaatctcccgatccctgagaacacagcctatgtcagaaatgcatTCgg                                                                                                                                                   <  2:1225204‑M1/4‑1 (MQ=255)
   aagggaagcactcatgcggccacccgatcgttgttcaacgcgttgttcaaatcaacatcctgaaagactgtttggctgtggtccgccgattgatgtgtggcgaatctcccgatccctgagaacacagcctatgtcagaaatgcatTCGgc                                                                                                                                                  >  1:1216460‑M1/146‑150 (MQ=255)
     cGAACATTCCCAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGgcgc                                                                                                                                                >  1:1050510/1‑150 (MQ=255)
         cATTCCCAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTc                                                                                                                                            <  1:1765956/150‑1 (MQ=255)
              ccAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGTATGAGCTGGGCAGAGCCTAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCcagca                                                                                                                                       <  1:1590892/150‑1 (MQ=255)
              ccAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCcagca                                                                                                                                       >  1:401597/1‑150 (MQ=255)
              ccAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCcagca                                                                                                                                       >  2:1767057/1‑150 (MQ=255)
              ccAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCcagca                                                                                                                                       >  1:1366916/1‑150 (MQ=255)
               cAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCACGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTCTCcagcag                                                                                                                                      >  1:1599495/1‑150 (MQ=255)
                aaGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGa                                                                                                                                     <  2:1798264/150‑1 (MQ=255)
                aaGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGa                                                                                                                                     >  2:102741/1‑150 (MQ=255)
                aaGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGa                                                                                                                                     >  1:1042424/1‑150 (MQ=255)
                  ggAACTGCACGGCATGGTTCCGGACCTGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACa                                                                                                                                   <  1:819424/150‑1 (MQ=255)
                  ggAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACa                                                                                                                                   <  2:1366916/150‑1 (MQ=255)
                       tGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGcc                                                                                                                              >  1:1904548/1‑150 (MQ=255)
                       cacccgatcgttgttcaacgcgttgttcaaatcaacatcctgaaagactgtttggctgtggtccgccgattgatgtgtggcgaatctcccgatccctgagaacacagcctatgtcagaaatgcatTCGGCGCTGTCCAGCAGACAGCGcc                                                                                                                              <  2:105262‑M1/25‑1 (MQ=255)
                              gaTGGTGCCGGACCGGAACATTGACGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCa                                                                                                                       <  2:159502/149‑1 (MQ=255)
                              cATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCACCAGGTGACCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCa                                                                                                                       <  2:553375/150‑1 (MQ=255)
                               aTGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCAt                                                                                                                      <  1:1473946/150‑1 (MQ=255)
                                 ggTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGCCAGGCCCGAATGCAttt                                                                                                                    <  2:1050510/150‑1 (MQ=255)
                                  gTTCCGGTCCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGcc                                                                                                                              <  2:1081518/139‑1 (MQ=255)
                                  gTTCCGGTCCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGcc                                                                                                                              >  1:1081518/1‑139 (MQ=255)
                                  gTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTcc                                                                                                                                           <  2:1114899/126‑1 (MQ=255)
                                  gTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTcc                                                                                                                                           >  1:1114899/1‑126 (MQ=255)
                                     ccggaccggaACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGa                                                                                                                <  2:1042424/150‑1 (MQ=255)
                                               gttcaaatcaacatcctgaaagactgtttggctgtggtccgccgattgatgtgtggcgaatctcccgatccctgagaacacagcctatgtcagaaatgcatTCGGCGCt                                                                                                                                               <  1:947694‑M1/8‑1 (MQ=255)
                                               gttcaaatcaacatcctgaaagactgtttggctgtggtccgccgattgatgtgtggcgaatctcccgatccctgagaacacagcctatgtcagaaatgcatTCGGCGCt                                                                                                                                               >  2:947694‑M1/102‑109 (MQ=255)
                                               aCATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCtgt                                                                                                      <  2:401597/150‑1 (MQ=255)
                                                cATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCtgtg                                                                                                     <  2:1904548/150‑1 (MQ=255)
                                                      cGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCa                                                                                               <  2:96130/150‑1 (MQ=255)
                                                       ggCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAg                                                                                              >  2:598732/1‑150 (MQ=255)
                                                             gCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCg                                                                                        <  1:1798689/150‑1 (MQ=255)
                                                               cTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTAAGCCACTTGCCCAATCCACCGCGGGTTGGCCTGATCCATTTATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCggg                                                                                      <  2:707297/150‑1 (MQ=255)
                                                                       tgtgGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGGCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGc                                                                              <  2:1682002/150‑1 (MQ=255)
                                                                         tgGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTNCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCca                                                                           <  1:1767057/150‑1 (MQ=255)
                                                                           gATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAgcgc                                                                                                                               >  1:1224237/1‑97 (MQ=255)
                                                                           gATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAgcgc                                                                                                                               <  2:1224237/97‑1 (MQ=255)
                                                                           gATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCcaca                                                                         >  1:1386092/1‑150 (MQ=255)
                                                                                 tggtccgccgattgatgtgtggcgaatctcccgatccctgagaacacagcctatgtcagaaatgcatTCGGCGCTGTCcagc                                                                                                                                        <  2:230124‑M1/15‑1 (MQ=255)
                                                                                 tggtccgccgattgatgtgtggcgaatctcccgatccctgagaacacagcctatgtcagaaatgcatTCGGCGCTGTCcagc                                                                                                                                        >  1:230124‑M1/68‑82 (MQ=255)
                                                                                       agagCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATcggcg                                                             <  1:1898189/150‑1 (MQ=255)
                                                                                           cccAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTAGCGGGGATCGGGAGATTCGCCACACATCAATCGGCGGTcc                                                         >  1:1373603/1‑150 (MQ=255)
                                                                                            ccAAACTCAGCCACTTGCCCAACCTGTCTCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACca                                                        >  1:346214/1‑150 (MQ=255)
                                                                                             cAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGc                                                                                                                        <  2:1608109/86‑1 (MQ=255)
                                                                                             cAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGc                                                                                                                        >  1:1608109/1‑86 (MQ=255)
                                                                                             cAAACTCAGCCACTTCGACAACCTGTCGCTGGATGGACATATTAAATAATACCCCTCGGCGATATCCAGAATACAGCGTAAAATGCATTTTTGACATAAGCTGTGTGCTCAGGGATCGGGAGATTCGCCACATAAAAATCGGCGGACcac                                                       <  2:121748/150‑1 (MQ=255)
                                                                                              aaaCTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACcaca                                                      >  2:280922/1‑150 (MQ=255)
                                                                                                aCTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATCCCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGc                                                    <  2:297993/150‑1 (MQ=255)
                                                                                                aCTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAg                                                                                              <  1:1489264/109‑1 (MQ=255)
                                                                                                aCTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAg                                                                                              >  2:1489264/1‑109 (MQ=255)
                                                                                                  tCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACAt                                                                      <  2:165031/130‑1 (MQ=255)
                                                                                                  tCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACAt                                                                      >  1:165031/1‑130 (MQ=255)
                                                                                                      ccACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAg                                                                                              <  2:1820644/103‑1 (MQ=255)
                                                                                                      ccACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAg                                                                                              >  1:1820644/1‑103 (MQ=255)
                                                                                                      ccACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGc                                                                              >  2:286905/1‑119 (MQ=255)
                                                                                                      ccACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGc                                                                              <  1:286905/119‑1 (MQ=255)
                                                                                                      ccACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACa                                              >  2:1621021/1‑150 (MQ=255)
                                                                                                            gCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCa                                                                                                                       <  1:1880408/72‑1 (MQ=255)
                                                                                                            gCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCa                                                                                                                       >  2:1880408/1‑72 (MQ=255)
                                                                                                             cccAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTc                                       <  1:102741/150‑1 (MQ=255)
                                                                                                                     gTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGtt                               <  1:598732/150‑1 (MQ=255)
                                                                                                                      tCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCaaa                                                >  1:1013815/1‑132 (MQ=255)
                                                                                                                      tCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCaaa                                                <  2:1013815/132‑1 (MQ=255)
                                                                                                                      ctgagaacacagcctatgtcagaaatgcatTCGGCGCTGTCTGCTGGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTg                              <  1:105262‑M1/120‑1 (MQ=255)
                                                                                                                       tgagaacacagcctatgtcagaaatgcatTCGGCGCTGTCTGCTGGACAGCGCCGATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGAt                            <  2:378181‑M1/121‑1 (MQ=255)
                                                                                                                        gcgGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGAt                            >  2:180019/1‑150 (MQ=255)
                                                                                                                        gagaacacagcctatgtcagaaatgcatTCGGCGCTGTCTGCTGGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACa                                              <  2:1906673‑M1/104‑1 (MQ=255)
                                                                                                                        gagaacacagcctatgtcagaaatgcatTCGGCGCTGTCTGCTGGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACa                                              >  1:1906673‑M1/29‑132 (MQ=255)
                                                                                                                        gagaacacagcctatgtcagaaatgcatTCGGCGCTGTCTGCTGGACAGCGCCGATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGAtt                           >  1:378181‑M1/29‑150 (MQ=255)
                                                                                                                            gTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGa                        >  2:1185240/1‑150 (MQ=255)
                                                                                                                                gCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCTGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGaacaa                    >  1:1666937/1‑150 (MQ=255)
                                                                                                                                gCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGaacaa                    >  1:1225204/1‑150 (MQ=255)
                                                                                                                                gCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGaacaa                    >  1:945574/1‑150 (MQ=255)
                                                                                                                                gCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGAACGGGTGCCCGCCTAGACATCAATCGGCTGACCACAGCCAAACAGTCTTTCAGGATGATGATTTGaacaa                    >  1:1684035/1‑150 (MQ=255)
                                                                                                                                 ccTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATcggc                                                              >  1:713369/1‑107 (MQ=255)
                                                                                                                                 ccTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATcggc                                                              <  2:713369/107‑1 (MQ=255)
                                                                                                                                 ccTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCa                                      <  1:1730710/131‑1 (MQ=255)
                                                                                                                                 ccTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCa                                      >  2:1730710/1‑131 (MQ=255)
                                                                                                                                       ccATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTg             >  2:1642305/1‑150 (MQ=255)
                                                                                                                                         aTTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCgg                                                                                       <  2:1642437/75‑1 (MQ=255)
                                                                                                                                         aTTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCgg                                                                                       >  1:1642437/1‑75 (MQ=255)
                                                                                                                                         aTTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGaa           <  1:180019/150‑1 (MQ=255)
                                                                                                                                                cccATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGAt    <  1:280922/150‑1 (MQ=255)
                                                                                                                                                 ccATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGaacaac                   <  2:1419086/134‑1 (MQ=255)
                                                                                                                                                 ccATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGaacaac                   >  1:1419086/1‑134 (MQ=255)
                                                                                                                                                  cATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCg  >  1:936553/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TGACCCGAACATTCCCAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCG  >  NC_002947/1633807‑1634102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.