| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1648974 = | 79 (1.080) | 9 (0.140) | 6/214 | NT | 13.1% | intergenic (‑211/+85) | oprB‑II/PP_1446 | carbohydrate‑selective porin/TonB‑dependent receptor |
| ? | NC_002947 | 1649030 = | 51 (0.810) | intergenic (‑267/+29) | oprB‑II/PP_1446 | carbohydrate‑selective porin/TonB‑dependent receptor | |||||
CCAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1649132‑1648974‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtgaacccgTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCACAAAC > NC_002947/1649030‑1649176 ccgGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGG > 2:1452485/4‑150CCAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAGGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGG < 1:1117826/150‑1CCAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGG < 1:1452485/150‑1CCAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGG < 1:290836/150‑1 AGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGT < 2:1576964/150‑1 TTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGA > 1:650322/1‑150 GTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCG > 2:486240/1‑150 CCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGG > 1:979390/1‑150 CCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAA > 1:1548694/1‑146 CCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAA < 2:1548694/146‑1 CCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGCTCCTACACCGATCTTCGTCGATTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGG > 1:174982/1‑150 CCGCGAATACGATGGTAGGGCAACCGGCACATTCGCGGGTGAACCCGCTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGG > 1:139316/1‑150 ACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGC < 1:486240/150‑1 GGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGG < 2:979390/150‑1 GGCAACCGGCACATTCGCGGGTGAACCCGCTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGT < 2:139316/150‑1 GCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCC > 2:1737791/1‑150 CGGGTGAACCCGGCCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGGGGTACGCAACCCGACTTCCACGCTACGCCCCGTCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCG < 2:747440/150‑1 GTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGC > 1:1663761/1‑150 ACCCGTTTCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCACAA > 1:658159/1‑150 CCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCACAAAC < 2:1352958/150‑1 CCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCACAAAC < 2:1761411/150‑1 CCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCACAAAC < 1:194086/150‑1 CCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGCCAGGATTTCGCCGCGCACAGAC > 2:109800/1‑150 GTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAG < 1:1080224/129‑1 GTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTAAG > 2:1080224/1‑129 CCAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1649132‑1648974‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtgaacccgTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCACAAAC > NC_002947/1649030‑1649176 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |