| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1678654 = | 84 (1.150) | 6 (0.090) | 5/230 | NT | 7.7% | intergenic (+94/+93) | PP_1473/PP_1474 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 1678682 = | 66 (0.980) | intergenic (+122/+65) | PP_1473/PP_1474 | hypothetical protein/hypothetical protein | |||||
GGCTGGACCTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1678811‑1678654‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggggTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGA > NC_002947/1678682‑1678783 GGCTGGACCTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGAC < 2:1757389/150‑1GGCTGGACCTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGAC < 1:971841/150‑1 GCTGGACCTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACG > 1:1242976/1‑150 GCTGGACCTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACG > 1:738470/1‑150 TGGACCTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCC > 2:72356/1‑150 gtACCTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCC < 2:887100/148‑1 ACCTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGG < 1:1030452/150‑1 CCTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGG < 2:644874/150‑1 CCTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGG < 2:738470/150‑1 CTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGGG < 1:182972/150‑1 CTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGGG > 1:1405666/1‑150 AGAAACCCCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCAGGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAG > 2:1440918/1‑114 AGAAACCCCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAG < 1:1440918/114‑1 AGAAACCCCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAA > 1:678082/1‑113 AGAAACCCCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAA < 2:678082/113‑1 CCCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGA < 2:1091485/129‑1 CCCGGGCGCTGGGGAAGACGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGA > 1:1091485/1‑129 GGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCG > 1:884052/1‑92 GGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCG < 2:884052/92‑1 GGCTGGACCTGGCATTGCGAGAAGACTATCTACAGGAAAGCCGGCGTTTCTTTGAGGACAAATAAGCCCAACCCGTATGCACGGTCGTTGCAGAAGCAGACGGGGGATACGTGCCTGCCGAAAAAAGAAACCCCGGGCGCTGGGGAAGACGCCCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1678811‑1678654‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggggTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGA > NC_002947/1678682‑1678783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |