New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1678654 =84 (1.150)6 (0.090) 5/230 NT 7.7% intergenic (+94/+93) PP_1473/PP_1474 hypothetical protein/hypothetical protein
?NC_002947 1678682 = 66 (0.980)intergenic (+122/+65) PP_1473/PP_1474 hypothetical protein/hypothetical protein

CCAGCAACCGCAGGGAACCTTTGCCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGCATA  >  NC_002947/1678533‑1678821
                                                                                                                                                     |                                                                                                                                           
ccAGCAACCGCAGGGAACCTTTGCCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGt                                                                                                                                             >  2:1187219/1‑150 (MQ=255)
   gCAACCGCAGGGAACCTTTGCCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTc                                                                                                                                          <  2:926109/150‑1 (MQ=255)
    cAACCGCAGGGAACCTTTGCCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCt                                                                                                                                         >  2:857677/1‑150 (MQ=255)
         gCAGGGAACCTTTGCCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCtttttt                                                                                                                                    >  1:671600/1‑150 (MQ=255)
          cAGGGAACCTTTGCCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTc                                                                                                                                   <  2:1102964/150‑1 (MQ=255)
            gggAACCTTTGCCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCCCGGGACGTCCTCAAGGGCTTTCGCCTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCgg                                                                                                                                 <  1:529210/150‑1 (MQ=255)
               aaCCTTTGCCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCggcag                                                                                                                              >  2:1430130/1‑150 (MQ=255)
                      gCCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCTGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTa                                                                                                                       >  1:154669/1‑150 (MQ=255)
                          gAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATccc                                                                                                                   >  1:359279/1‑150 (MQ=255)
                           aGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATcccc                                                                                                                  <  2:671600/150‑1 (MQ=255)
                               gTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTc                                                                                                              <  1:108085/150‑1 (MQ=255)
                                  catcaGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGc                                                                                                           >  1:1590764/1‑150 (MQ=255)
                                    tcaGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCtt                                                                                                         <  2:150494/150‑1 (MQ=255)
                                    tcaGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCtt                                                                                                         <  2:34973/150‑1 (MQ=255)
                                      aGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCt                                                                                                       <  2:337772/150‑1 (MQ=255)
                                      aGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCt                                                                                                       <  2:732036/150‑1 (MQ=255)
                                       gACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTg                                                                                                      >  2:1752924/1‑150 (MQ=255)
                                       gACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTg                                                                                                      >  2:913005/1‑150 (MQ=255)
                                        ctttgaggacaaataagcccaacccgtatgcacggtcgttgcagaagcagacgggggatacgtgcctgccgaaaaaagaaaCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCt                                                                                                                                         <  1:1440918‑M1/33‑1 (MQ=255)
                                        ctttgaggacaaataagcccaacccgtatgcacggtcgttgcagaagcagacgggggatacctgcctgccgaaaaaagaaaCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCt                                                                                                                                         >  2:1440918‑M1/82‑114 (MQ=255)
                                         tttgaggacaaataagcccaacccgtatgcacggtcgttgcagaagcagacgggggatacgtgcctgccgaaaaaagaaaCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCt                                                                                                                                         <  2:678082‑M1/33‑1 (MQ=255)
                                         tttgaggacaaataagcccaacccgtatgcacggtcgttgcagaagcagacgggggatacgtgcctgccgaaaaaagaaaCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCt                                                                                                                                         >  1:678082‑M1/81‑113 (MQ=255)
                                                 gggCAGCCAGCCCGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGt                                                                                            <  1:475381/150‑1 (MQ=255)
                                                 gggCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGt                                                                                            >  1:894444/1‑150 (MQ=255)
                                                    cagccagcCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCa                                                                                         <  2:743845/150‑1 (MQ=255)
                                                    cagccagcCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCa                                                                                         <  1:896543/150‑1 (MQ=255)
                                                     agccagccAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCAt                                                                                        >  2:817807/1‑150 (MQ=255)
                                                        cagccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGt                                                                                            <  2:1295049/143‑1 (MQ=255)
                                                        cagccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGt                                                                                            >  1:1295049/1‑143 (MQ=255)
                                                           ccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGGCCTCAAGGGCTTTCGCTTGGCGGCGGGCGTCTTGGCCACTTCCGCGAAGCCCGTGTTGGGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGt                                                                                  >  1:1893077/1‑150 (MQ=255)
                                                            cagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGtt                                                                                 <  1:1187219/150‑1 (MQ=255)
                                                              ttGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTTGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTgg                                                                               <  2:813981/149‑1 (MQ=255)
                                                                 cTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCt                                                                            >  1:1626774/1‑150 (MQ=255)
                                                                  tttGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCtttt                                                                                                                                      <  2:134678/91‑1 (MQ=255)
                                                                  tttGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCtttt                                                                                                                                      >  1:134678/1‑91 (MQ=255)
                                                                  tttGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTg                                                                                <  2:829085/145‑1 (MQ=255)
                                                                  tttGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTg                                                                                >  1:829085/1‑145 (MQ=255)
                                                                         cGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGTACGTATCCCCCGTGTGCTTCGGCAACTACCGTGCATACGGGTTGGGCTTATTTGTc                                                                    <  1:1752924/150‑1 (MQ=255)
                                                                         cGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTc                                                                    <  1:1060114/150‑1 (MQ=255)
                                                                         cGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTc                                                                    <  2:1441296/150‑1 (MQ=255)
                                                                         cGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTc                                                                    >  1:1441296/1‑150 (MQ=255)
                                                                               tGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCaaa                                                              <  1:817807/150‑1 (MQ=255)
                                                                               tGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCaaa                                                              <  2:154669/150‑1 (MQ=255)
                                                                                 gCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTAt                                                                         >  2:1804196/1‑137 (MQ=255)
                                                                                 gCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTAt                                                                         <  1:1804196/137‑1 (MQ=255)
                                                                                 gCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGa                                                            >  2:1458914/1‑150 (MQ=255)
                                                                                 gCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGGCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGa                                                            >  2:942718/1‑150 (MQ=255)
                                                                                   aaGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTTTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGaaa                                                          <  1:404937/150‑1 (MQ=255)
                                                                                   aaGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGaaa                                                          >  1:1196119/1‑150 (MQ=255)
                                                                                    aGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAAc                                                         <  1:913005/150‑1 (MQ=255)
                                                                                      gCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGc                                                       <  2:1929827/150‑1 (MQ=255)
                                                                                        tGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCg                                                     <  2:693181/150‑1 (MQ=255)
                                                                                          tCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGc                                                   >  2:967990/1‑150 (MQ=255)
                                                                                            aCGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGc                                                                             <  2:1656432/122‑1 (MQ=255)
                                                                                            aCGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGc                                                                             >  1:1656432/1‑122 (MQ=255)
                                                                                              gggAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTc                                                                    <  2:1322361/129‑1 (MQ=255)
                                                                                              gggAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTc                                                                    >  1:1322361/1‑129 (MQ=255)
                                                                                                   gTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTGTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCCCGTCTCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTa                                          <  1:1292030/150‑1 (MQ=255)
                                                                                                     ccTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGa                                        <  1:1430130/150‑1 (MQ=255)
                                                                                                       tCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATa                                      >  1:72356/1‑150 (MQ=255)
                                                                                                       tCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATa                                      <  1:942718/150‑1 (MQ=255)
                                                                                                          aGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGtc                                   <  2:1590764/150‑1 (MQ=255)
                                                                                                           gggCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGtct                                  >  2:1405666/1‑150 (MQ=255)
                                                                                                               tttCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTtctc                              <  1:22849/150‑1 (MQ=255)
                                                                                                               tttCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTtctc                              >  2:565032/1‑150 (MQ=255)
                                                                                                               tttCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTtctc                              <  1:967990/150‑1 (MQ=255)
                                                                                                               tttCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTACTGTCGATAGttttttt                              >  2:1866030/1‑147 (MQ=255)
                                                                                                                ttCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCg                             >  2:1242976/1‑150 (MQ=255)
                                                                                                                ttCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCg                             <  2:1196119/150‑1 (MQ=255)
                                                                                                                    cTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAAt                         <  1:857677/150‑1 (MQ=255)
                                                                                                                    agaaaccccgggcgctggggaagacgcccggggTTTCTTTTTTCGGCAGGCAGGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAg                                                             >  2:1440918‑M2/34‑114 (MQ=255)
                                                                                                                    agaaaccccgggcgctggggaagacgcccggggTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCaaa                                                              <  2:678082‑M2/80‑1 (MQ=255)
                                                                                                                    agaaaccccgggcgctggggaagacgcccggggTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCaaa                                                              >  1:678082‑M2/34‑113 (MQ=255)
                                                                                                                    agaaaccccgggcgctggggaagacgcccggggTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAg                                                             <  1:1440918‑M2/81‑1 (MQ=255)
                                                                                                                         CCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAg                    >  1:1405666‑M1/1‑150 (MQ=255)
                                                                                                                         CCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAg                    <  1:182972‑M1/150‑1 (MQ=255)
                                                                                                                          cccgggcgctggggaagacgcccggggTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGa                                        <  2:1091485‑M2/102‑1 (MQ=255)
                                                                                                                          cccgggcgctggggaagacgcccggggTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGa                                        >  1:1091485‑M2/28‑129 (MQ=255)
                                                                                                                          CCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAgg                   <  2:644874‑M1/150‑1 (MQ=255)
                                                                                                                          CCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAgg                   <  2:738470‑M1/150‑1 (MQ=255)
                                                                                                                           CCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGt                  <  1:1030452‑M1/150‑1 (MQ=255)
                                                                                                                             GGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAggtac                <  2:887100‑M1/150‑3 (MQ=255)
                                                                                                                              GGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCa               >  2:72356‑M1/1‑150 (MQ=255)
                                                                                                                                CGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGc             >  1:1242976‑M1/1‑150 (MQ=255)
                                                                                                                                CGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGc             >  1:738470‑M1/1‑150 (MQ=255)
                                                                                                                                 GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGcc            <  2:1757389‑M1/150‑1 (MQ=255)
                                                                                                                                 GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGcc            <  1:971841‑M1/150‑1 (MQ=255)
                                                                                                                                    ttCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCcagccagc         <  2:971841/150‑1 (MQ=255)
                                                                                                                                    ttCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCcagccagc         >  2:444218/1‑150 (MQ=255)
                                                                                                                                      ccccAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCgg       <  1:1458914/150‑1 (MQ=255)
                                                                                                                                        ccAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGc     >  2:864315/1‑150 (MQ=255)
                                                                                                                                         cAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCt                                                                            <  1:1440554/78‑1 (MQ=255)
                                                                                                                                         cAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCt                                                                            >  2:1440554/1‑78 (MQ=255)
                                                                                                                                         cAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGa                                        <  1:1866994/114‑1 (MQ=255)
                                                                                                                                         cAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGa                                        >  2:1866994/1‑114 (MQ=255)
                                                                                                                                           gcgcCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGCATa  <  1:1866030/150‑1 (MQ=255)
                                                                                                                                           gcgcCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGCATa  <  1:444218/150‑1 (MQ=255)
                                                                                                                                                  gggTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCg                                                     <  2:884052‑M2/89‑1 (MQ=255)
                                                                                                                                                  gggTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCg                                                     >  1:884052‑M2/4‑92 (MQ=255)
                                                                                                                                                     |                                                                                                                                           
CCAGCAACCGCAGGGAACCTTTGCCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGCATA  >  NC_002947/1678533‑1678821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.