| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1778342 = | 49 (0.670) | 4 (0.060) | 4/236 | NT | 7.8% | intergenic (‑156/‑41) | PP_1586/PP_1587 | killer protein/NhaP‑type Na+(K+)/H+ antiporter |
| ? | NC_002947 | 1778369 = | 48 (0.690) | intergenic (‑183/‑14) | PP_1586/PP_1587 | killer protein/NhaP‑type Na+(K+)/H+ antiporter | |||||
AGCTTCGACAGGCTGACCAGCGTCAGCAGGATGAGAACGGTGTAGGCGGACTGCATCCGGGAAAGCTTCCTTTGTGAACCAGAAACGATAGCAAGGCGAAACATCGCCATTGGAACAATATGTTAGCGGCGACCGGCGGTTCGGGGCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1778492‑1778342‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgctAACATATTGTTCCAATGGCGATGTTTCGCCTTGCTATCGTTTCTGGTTCACAAAGGAAGCTTTCCCGGATGCAGTCCGCCTACACCGTT > NC_002947/1778369‑1778457 AGCTTCGACAGGCTGACCAGCGTCAGCAGGATGAGAACGGTGTAGGCGGACTGCATCCGGGAAAGCTTCCTTTGTGAACCAGAAACGATAGCAAGGCGAAACATCGCCATTGGAACAATATGTTAGCGGCGACCGGCGGTTCGGGGCCGC < 2:568450/150‑1AGCTTCGACAGGCTGACCAGCGTCAGCAGGATGAGAACGGTGTAGGCGGACTGCATCCGGGAAAGCTTCCTTTGTGAACCAGAAACGATAGCAAGGCGAAACATCGCCATTGGAACAATATGTTAGCGGCGACCGGCGGTTCGGGGCCGC < 2:865220/150‑1 TTAGCGGCGACCGGCGGTTCGGGGCCGCTAACATATTGTTCCAATGGCGACGTTTCGCCTTGCTATCGTTTCTGGTTCACAAAGGAA > 1:867115/1‑87 TTAGCGGCGACCGGCGGTTCGGGGCCGCTAACATATTGTTCCAATGGCGACGTTTCGCCTTGCTATCGTTTCTGGTTCACAAAGGAA < 2:867115/87‑1 GCGGCGACCGGCGGTTCGGGGCCGCTAACATATTGTTCCAATGGCGATGTTTCGCCTTGCTATCGTTTCTGGTTCACAAAGGAAG < 1:783617/85‑1 GCGGCGACCGGCGGTTCGGGGCCGCTAACATATTGTTCCAATGGCGATGTTTCGCCTTGCTATCGTTTCTGGTTCACAAAGGAAG > 2:783617/1‑85 CCGCTAACATATTGTTCCAATGGCGATGTTTCGCCTTGCTATCGTTTCTGGTTCACAAAGGAAGCTTTCCCGGATGCAGTCCGCCTACAC < 1:1769068/90‑1 CCGCTAACATATTGTTCCAATGGCGATGTTTCGCCTTGCTATCGTTTCTGGTTCACAAAGGAAGCTTTCCCGGATGCAGTCCGCCTACAC > 2:1769068/1‑90 CTAACATATTGTTCCAATGGCGATGTTTCGCCTTGCTATCGTTTCTGGTTCACAAAGGAAGCTTTCCCGGATGCAGTCCGCCTACACCGTT > 1:1028088/1‑91 CTAACATATTGTTCCAATGGCGATGTTTCGCCTTGCTATCGTTTCTGGTTCACAAAGGAAGCTTTCCCGGATGCAGTCCGCCTACACCGTT < 2:1028088/91‑1 AGCTTCGACAGGCTGACCAGCGTCAGCAGGATGAGAACGGTGTAGGCGGACTGCATCCGGGAAAGCTTCCTTTGTGAACCAGAAACGATAGCAAGGCGAAACATCGCCATTGGAACAATATGTTAGCGGCGACCGGCGGTTCGGGGCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1778492‑1778342‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgctAACATATTGTTCCAATGGCGATGTTTCGCCTTGCTATCGTTTCTGGTTCACAAAGGAAGCTTTCCCGGATGCAGTCCGCCTACACCGTT > NC_002947/1778369‑1778457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |