| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1834630 | 64 (0.880) | 4 (0.060) | 4/238 | NT | 6.4% | coding (447/780 nt) | fpr‑I | ferredoxin‑‑NADP(+) reductase |
| ? | NC_002947 | = 1834647 | 56 (0.800) | coding (464/780 nt) | fpr‑I | ferredoxin‑‑NADP(+) reductase | |||||
CTGGTCCTCGACGACCTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1834481‑1834630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaacTCGCGGTAGGCCACTTCGTTCACATAGCGCACGCCGTGCACCAGGATCACTTTTTCAAAGCGCTCGTAGGTTTCCGGGTCCTGGATGACGCTCATGAACGGCGCCAGACCAGTGCCGGTGCTCAGCAGGTACAGGTGCTTGCCAGGA < NC_002947/1834647‑1834501 CTGGTCCTCGACGACCTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAAC < 1:277643/150‑1 GCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACTCGCGGTAGGCCACTTCGTTCACATAGCGCACGCCGTGCACCAGGATCACTTTT < 1:1129268/139‑1 GCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACTCGCGGTAGGCCACTTCGTTCACATAGCGCACGCCGTGCACCAGGATCACTTTT > 2:1129268/1‑139 TGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACTCGCGGTAGGCCACTTCGTTC < 1:1049993/98‑1 TGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACTCGCGGTAGGCCACTTCGTTC > 2:1049993/1‑98 TGAACTCGCGGTAGGCCACTTCGTTCACATAGCGCACGCCGTGCACCAGGATCACTTTTTCAAAGCGCTCGTAGGTTTCCGGGTCCTGGATGACGCTCATGAACGGCGCCAGACCAGTGCCGGTGCTCAGCAGGTACAGGTGCTTGCCAG > 1:194639/1‑150 TGAACGCGCGGTAGGCCACTTCGTTCACATAGCGCACGCCGTGCACCAGGATCACTTTTTCAAAGCGCTCGTAGGTTTCCGGGTCCTGGATGACGCTCATGAACGGCGCCAGACCAGTGCCGGTGCTCAGCAGGTACAGGTGCTTGCCAG < 1:109361/150‑1 GAACTCGCGGTAGGCCACTTCGTTCACATAGCGCACGCCGTGCACCAGGATCACTTTTTCAAAGCGCTCGTAGGTTTCCGGGTCCTGGATGACGCTCATGAACGGCGCCAGACCAGTGCCGGTGCTCAGCAGGTACAGGTGCTT > 1:1415622/1‑144 GAACTCGCGGTAGGCAACTTCGTTCACATAGCGCACGCCGTGCACCAGGATCACTTTTTCAAAGCGCTCGTAGGTTTCCGGGTCCTGGATGACGCTCATGAACGGCGCCAGACCAGTGCCGGTGCTCAGCAGGTACAGGTGCTT < 2:1415622/144‑1 AACTCGCAGTATGCCACTTCGTTCACATAGCGCACGCCGTGCACCAGGATCACTTTTTAAAAGCGCTCGTAGGTTTCCGGGTCCTGGATGACGCTCATGAACGGCGCCAGACCAGTGCCAGTGCTCAGCAGGTACAGGTGCTTGCCAGGA < 1:223599/150‑1 ACTCGCGGTAGGCCACTTCGTTCACATAGCGCACGCCGTGCACCAGGATCACTTTTTCAAAGCGCTCGTAGGTTTCCGGGTCCTGGATGACGCTCATGAACGGCGCCAGACCAGTGCCGGTGCTCAGCAGGTACAGGT > 1:813992/1‑138 ACTCGCGGTAGGCCACTTCGTTCACATAGCGCACGCCGTGCACCAGGATCACTTTTTCAAAGCGCTCGTAGGTTTCCGGGTCCTGGATGACGCTCATGAACGGCGCCAGACCAGTGCCGGTGCTCAGCAGGTACAGGT < 2:813992/138‑1 CTGGTCCTCGACGACCTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1834481‑1834630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaacTCGCGGTAGGCCACTTCGTTCACATAGCGCACGCCGTGCACCAGGATCACTTTTTCAAAGCGCTCGTAGGTTTCCGGGTCCTGGATGACGCTCATGAACGGCGCCAGACCAGTGCCGGTGCTCAGCAGGTACAGGTGCTTGCCAGGA < NC_002947/1834647‑1834501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |