New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1834630	64 (0.880)	4 (0.060)	4/238	NT	6.4%	coding (447/780 nt)	fpr‑I	ferredoxin‑‑NADP(+) reductase
	?	NC_002947	= 1834647	56 (0.800)					coding (464/780 nt)	fpr‑I	ferredoxin‑‑NADP(+) reductase

CTGGTCCTCGACGACCTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTGACCGACCTGATGCGCAGC  >  NC_002947/1834481‑1834777                                                                                                                                                      |                                                                                                                                                    cTGGTCCTCGACGACCTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAAC                                                                                                                                                     <  1:277643‑M1/150‑1 (MQ=255)   ggTCCTCGACGACCTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGa                                                                                                                                                   >  1:317613/1‑150 (MQ=255)     tCCTCGACGACCTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAg                                                                                                                                                 <  1:897081/150‑1 (MQ=255)       cTCGACGACCTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCTTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTg                                                                                                                                               <  1:717830/150‑1 (MQ=255)          gacgacCTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGcc                                                                                                                                            <  2:1417738/150‑1 (MQ=255)             gacCTGAATCCTGGCAAGCACCTATACCTGCTGAGCACCGGCACTCGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTAc                                                                                                                                         <  1:1666457/150‑1 (MQ=255)                cTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACcgc                                                                                                                                      >  1:459082/1‑150 (MQ=255)                cTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGCCGTGCGCTATGTGAACGAAGTGGCCTACcgg                                                                                                                                      >  2:897694/1‑149 (MQ=255)                     tCCTGGCAAGCACCTGTACCTGCTGAGCACTGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTTAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCATACTGCGAgtt                                                                                                                                 <  1:223599‑M2/150‑4 (MQ=255)                       cTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGCgttca                                                                                                                               <  1:109361‑M2/150‑6 (MQ=255)                       cTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAgttca                                                                                                                               >  1:194639‑M2/1‑145 (MQ=255)                        tGGCAAGCACCTCTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTtcat                                                                                                                              >  2:1752094/1‑150 (MQ=255)                         ggCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTtcatc                                                                                                                             <  2:317613/150‑1 (MQ=255)                           cAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCAc                                                                                                                           <  2:459082/150‑1 (MQ=255)                            aaGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTTGCCTACCGCGAgttc                                                                                                                                <  2:1415622‑M2/144‑5 (MQ=255)                            aaGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAgttc                                                                                                                                >  1:1415622‑M2/1‑140 (MQ=255)                             aGCACCTGTACTTGCTGAGCACCGGCTTTCGTCTTGCGGCGTTCATAAGCGTCAACCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTAGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTTATCACCg                                                                                                                         <  2:223599/150‑1 (MQ=255)                               aaCCGGTTCCTGCGGAGCAGCGGCAGTGGTGTGGCGCCGTTCATGAGCGTCATCCGGGGCCCGGACACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGGAGTGGCCTACCGCGGGTTCATCACCGAg                                                                                                                       <  2:109361/149‑1 (MQ=255)                                aCCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAgt                                                                                                                                  >  1:813992‑M2/1‑136 (MQ=255)                                aCCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAgt                                                                                                                                  <  2:813992‑M2/138‑3 (MQ=255)                                 ccTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCCTGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCa                                                                                                                     >  2:487242/1‑150 (MQ=255)                                        ctgctgAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCg                                                                                                              >  1:1223926/1‑150 (MQ=255)                                             gAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTCGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGaa                                                                                                         <  2:1389524/150‑1 (MQ=255)                                                 aCCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCAAGGACCGTGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAg                                                                                                     >  1:933801/1‑150 (MQ=255)                                                  ccGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGt                                                                                                    >  2:556800/1‑150 (MQ=255)                                                   cGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAg                                                                                                                                                 >  2:257785/1‑104 (MQ=255)                                                   cGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAg                                                                                                                                                 <  1:257785/104‑1 (MQ=255)                                                   cGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGa                                                                                                                                    >  2:132929/1‑117 (MQ=255)                                                   cGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGa                                                                                                                                    <  1:132929/117‑1 (MQ=255)                                                   cGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGtt                                                                                                   <  1:1617304/150‑1 (MQ=255)                                                    ggCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGcc                                                                                                                                            <  2:191036/108‑1 (MQ=255)                                                    ggCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGcc                                                                                                                                            >  1:191036/1‑108 (MQ=255)                                                       aCTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGttcttc                                                                                               <  1:1338057/150‑1 (MQ=255)                                                                gcgcCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCg                                                                                      <  1:556800/150‑1 (MQ=255)                                                                 cgcCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGTTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTCCCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCgg                                                                                     <  1:1483063/150‑1 (MQ=255)                                                                  gcCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACtcgcggtaggccacttcgttcacatagcgcacgccgtgcaccaggatcactttt                                                                                               >  2:1129268‑M1/1‑85 (MQ=255)                                                                  gcCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACtcgcggtaggccacttcgttcacatagcgcacgccgtgcaccaggatcactttt                                                                                               <  1:1129268‑M1/139‑55 (MQ=255)                                                                  gcCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGt                                                                                    <  1:361033/150‑1 (MQ=255)                                                                     gTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTcg                                                                                 >  1:185295/1‑150 (MQ=255)                                                                      ttCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTTCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTcgc                                                                                >  2:1438424/1‑150 (MQ=255)                                                                          tGAGCGTCATCCAGTAGCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACAGCGTGCGTTATGTAAAGGAAGTGGCCTACCGAGAGTTCATCACCGAGCAGCTGCCGCAGAACGAGTTCTTCTGTGAGTCGGTTCGTGACa                                                                            >  2:585611/1‑150 (MQ=255)                                                                          tGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAGAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACa                                                                            >  1:1854914/1‑150 (MQ=255)                                                                          tGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACtcgcggtaggccacttcgttc                                                                                                                                >  2:1049993‑M1/1‑77 (MQ=255)                                                                          tGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACtcgcggtaggccacttcgttc                                                                                                                                <  1:1049993‑M1/98‑22 (MQ=255)                                                                          tGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAAc                                                                                                        >  1:951529/1‑122 (MQ=255)                                                                          tGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAAc                                                                                                        <  2:951529/122‑1 (MQ=255)                                                                           gAGCGTCATCCAGGACCCGGAAAACTACCAGCCCATTGAATCAATGATCCTGGTGCACGGCGTGCGCTATGAGGACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACTTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACaa                                                                           <  1:1096623/150‑1 (MQ=255)                                                                                  aTCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATc                                                                    <  1:186419/150‑1 (MQ=255)                                                                                  aTCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATc                                                                    <  1:810084/150‑1 (MQ=255)                                                                                     cAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATctac                                                                 <  2:1136998/150‑1 (MQ=255)                                                                                      aGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGt                                                                                                                                                >  2:1458042/1‑70 (MQ=255)                                                                                      aGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGt                                                                                                                                                <  1:1458042/70‑1 (MQ=255)                                                                                         aCCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTcgc                                                                                >  1:291947/1‑131 (MQ=255)                                                                                         aCCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTcgc                                                                                <  2:291947/131‑1 (MQ=255)                                                                                         aCCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTAcc                                                             <  1:1283743/150‑1 (MQ=255)                                                                                            cGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGa                                                          >  1:258100/1‑150 (MQ=255)                                                                                                 aCCTAAGAGCGCGTTGAAAAAGGGATCCTGGTGCACGGCGTCCGCTCTCTGAACGAAGTGGCCTACCGCGAGTTAATCACCGAGCCCCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTg                                                     <  2:393414/150‑1 (MQ=255)                                                                                                    tACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGa                                                                                                                                    <  1:987029/68‑1 (MQ=255)                                                                                                    tACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGa                                                                                                                                    >  2:987029/1‑68 (MQ=255)                                                                                                             tttGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCg                                         >  2:1787063/1‑150 (MQ=255)                                                                                                                gAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTCCACGAAGAAGTCTTCCTCGATTTCATCATCGAGCACCTAACGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTc                                      <  1:1099450/150‑1 (MQ=255)                                                                                                                  aaaaGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAgttcacatagcgcacgccgtgcaccaggatcactttttcaaagcgctcgtaggtttccgggtcctggatgacgctcatgaacggc                                               >  2:1129268‑M2/1‑54 (MQ=255)                                                                                                                  aaaaGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAgttcacatagcgcacgccgtgcaccaggatcactttttcaaagcgctcgtaggtttccgggtcctggatgacgctcatgaacggc                                               <  1:1129268‑M2/139‑86 (MQ=255)                                                                                                                  aaaaGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGc                                                                                                             >  1:38426/1‑77 (MQ=255)                                                                                                                  aaaaGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGc                                                                                                             <  2:38426/77‑1 (MQ=255)                                                                                                                   aaaGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGTCGTTCGaa                                   >  2:215173/1‑150 (MQ=255)                                                                                                                          tCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCtactac                                                              >  1:843791/1‑116 (MQ=255)                                                                                                                          tCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCtactac                                                              <  2:843791/116‑1 (MQ=255)                                                                                                                           ccTGGGGCACGGCGTGCGCTATGTTTACTAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAggg                           <  2:933801/150‑1 (MQ=255)                                                                                                                             tGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCg                                                                                              >  2:1240961/1‑81 (MQ=255)                                                                                                                             tGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCg                                                                                              <  1:1240961/81‑1 (MQ=255)                                                                                                                               gTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGTCGTTCGAAAACCAGGGCCGt                       <  1:215173/150‑1 (MQ=255)                                                                                                                                tGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTc                      <  2:258100/150‑1 (MQ=255)                                                                                                                                 gCACGGCGTGCGCTATGGGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCAACAAGCTGAAATGCTACTGCAACGAAACCCGCGAGCCGTGCGAAAACCAGGGCCGTCt                     >  2:990794/1‑150 (MQ=255)                                                                                                                                  cACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCg                                                                                      >  2:1614113/1‑84 (MQ=255)                                                                                                                                  cACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCg                                                                                      <  1:1614113/84‑1 (MQ=255)                                                                                                                                   aCGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTga                   >  2:292495/1‑150 (MQ=255)                                                                                                                                    cGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTgac                  <  2:185295/150‑1 (MQ=255)                                                                                                                                        gTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTgaccgac              <  1:897694/150‑1 (MQ=255)                                                                                                                                            gcTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCGGCAGAACGAGTTCTTTGGTCAGTCGGTTCGCGACAAGCTGTTCTACTACCCGACCGTGACCGGCGAGCCGTTCGAAAAACATGGCCGTCTGACCGACCTGa          >  2:328734/1‑150 (MQ=255)                                                                                                                                            gcTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTGACCGACCTGa          <  1:1146204/150‑1 (MQ=255)                                                                                                                                              tATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTGACCGACCTGATg        <  2:964435/150‑1 (MQ=255)                                                                                                                                               aTGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTGACCGACCTGATgc       >  2:1435816/1‑150 (MQ=255)                                                                                                                                                tgtgAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTGACCGACCTGATgcg      >  2:1225242/1‑150 (MQ=255)                                                                                                                                                  tgAACtcgcggtaggccacttcgttcacatagcgcacgccgtgcaccaggatcactttttcaaagcgctcgtaggtttccgggtcctggatgacgctcatgaacggcgccagaccagtgccggtgctcagcaggtacaggtgcttgccag    >  1:194639‑M1/1‑5 (MQ=255)                                                                                                                                                  tgAACgcgcggtaggccacttcgttcacatagcgcacgccgtgcaccaggatcactttttcaaagcgctcgtaggtttccgggtcctggatgacgctcatgaacggcgccagaccagtgccggtgctcagcaggtacaggtgcttgccag    <  1:109361‑M1/150‑146 (MQ=255)                                                                                                                                                  tgAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTGACCGACCTGATGCGCa    >  2:1129430/1‑150 (MQ=255)                                                                                                                                                   gAACtcgcggtaggccacttcgttcacatagcgcacgccgtgcaccaggatcactttttcaaagcgctcgtaggtttccgggtcctggatgacgctcatgaacggcgccagaccagtgccggtgctcagcaggtacaggtgctt         >  1:1415622‑M1/1‑4 (MQ=255)                                                                                                                                                   gAACtcgcggtaggcaacttcgttcacatagcgcacgccgtgcaccaggatcactttttcaaagcgctcgtaggtttccgggtcctggatgacgctcatgaacggcgccagaccagtgccggtgctcagcaggtacaggtgctt         <  2:1415622‑M1/144‑141 (MQ=255)                                                                                                                                                   gAACGAAGTGGCCTACCGCGAgttcacatagcgcacgccgtgcaccaggatcactttttcaaagcgctcgtaggtttccgggtcctggatgacgctca                                                       <  1:1049993‑M2/98‑78 (MQ=255)                                                                                                                                                   gAACGAAGTGGCCTACCGCGAgttcacatagcgcacgccgtgcaccaggatcactttttcaaagcgctcgtaggtttccgggtcctggatgacgctca                                                       >  2:1049993‑M2/1‑21 (MQ=255)                                                                                                                                                    aaCtcgcagtatgccacttcgttcacatagcgcacgccgtgcaccaggatcactttttaaaagcgctcgtaggtttccgggtcctggatgacgctcatgaacggcgccagaccagtgccagtgctcagcaggtacaggtgcttgccagga  <  1:223599‑M1/150‑148 (MQ=255)                                                                                                                                                    aaCGAAGTGGCCTACCGTGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTGACCGACCTGATGCGCAGc  >  1:455387/1‑150 (MQ=255)                                                                                                                                                    aaCGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTGACCGACCTGATGCGCAGc  >  1:248844/1‑150 (MQ=255)                                                                                                                                                     aCtcgcggtaggccacttcgttcacatagcgcacgccgtgcaccaggatcactttttcaaagcgctcgtaggtttccgggtcctggatgacgctcatgaacggcgccagaccagtgccggtgctcagcaggtacaggt             <  2:813992‑M1/138‑137 (MQ=255)                                                                                                                                                     aCtcgcggtaggccacttcgttcacatagcgcacgccgtgcaccaggatcactttttcaaagcgctcgtaggtttccgggtcctggatgacgctcatgaacggcgccagaccagtgccggtgctcagcaggtacaggt             >  1:813992‑M1/1‑2 (MQ=255)                                                                                                                                                      |                                                                                                                                                    CTGGTCCTCGACGACCTGAATCCTGGCAAGCACCTGTACCTGCTGAGCACCGGCACTGGTCTGGCGCCGTTCATGAGCGTCATCCAGGACCCGGAAACCTACGAGCGCTTTGAAAAAGTGATCCTGGTGCACGGCGTGCGCTATGTGAACGAAGTGGCCTACCGCGAGTTCATCACCGAGCACCTGCCGCAGAACGAGTTCTTCGGTGAGTCGGTTCGCGACAAGCTGATCTACTACCCGACCGTGACCCGCGAGCCGTTCGAAAACCAGGGCCGTCTGACCGACCTGATGCGCAGC  >  NC_002947/1834481‑1834777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.