| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1946569 = | 80 (1.100) | 6 (0.090) | 6/234 | NT | 7.6% | intergenic (‑55/+29) | PP_1747/PP_1748 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 1946592 = | 71 (1.030) | intergenic (‑78/+6) | PP_1747/PP_1748 | hypothetical protein/hypothetical protein | |||||
TGCCAGCGATTCGCAGCCGGCCAATACGTCACTTGAGCGCTTCAGCCACCAGCTGGAGCACGATGCGCAGATGGAAAGCGACACGCGGGTACCGGCCGTGGACAGCCTGGTCGGAAACAAAGGCTAAACGCCCTTGGGGCTGCAAAGCGGCCCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1946724‑1946569‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccaaGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATACGGGCGGGCT > NC_002947/1946592‑1946738 TGCCAGCGATTCGCAGCCGGCCAATACGTCACTTGAGCGCTTCAGCCACCAGCTGGAGCACGATGCGCAGATGGAAAGCGACACGCGGGTACCGGCCGTGGACAGCCTGGTCGGAAACAAAGGCTAAACGCCCTTGGGGCTGCAAAGCGG < 2:1270921/150‑1TGCCAGCGATTCGCAGCCGGCCAATACGTCACTTGAGCGCTTCAGCCACCAGCTGGAGCACGATGCGCAGATGGAAAGCGACACGCGGGTACCGGCCGTGGACAGCCTGGTCGGAAACAAAGGCTAAACGCCCTTGGGGCTGCAAAGCGG < 2:1797504/150‑1 GCCAGCGATTCGCAGCCGGCCAATACGTCACTTGAGCGCTTCAGCCACCAGCTGGAGCACGATGCGCAGATGGAAAGCGACACGCGGGTACCGGCCGTGGACAGCCTGGTCGGAAACAAAGGCTAACCGCCCTTGGGGCTGCAAAGCGGC < 1:1616988/150‑1 CCAGCGCTTCGCAGCCGGCCAATACGTCACTTGAGCGCTTCAGCCACCAGCTGGAGCACGATGCGCAGATGGAAAGCGACACGCGGGTACCGGCCGTGGACAGCCTGGTCGGAAACAAAGGCTAAACGCCCTTGGGGCTGCAAAGCGGCC > 1:943748/1‑150 GAGCGCTTCAGCCACCAGCTGGAGCACGATGCGCAGATGGAAAGCGACACGCGGGTACCGGCCGTGGACAGCCTGGTCGGAAACAAAGGCTAAACGCCCTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGG < 2:339952/150‑1 CCTGGTCGGAAACAAAGGCTAAACGCCCTTGGGGCCGCTTTGCAGCCACAAGGGCGTTTAGCCTTTGTTTTCGACCAGGCTGTCCACGGCCGGTACCCCCGTGTCGCTTTCCATCTGCGCATCTTGCTCCAGCTGTTGACTGACGCGCTC > 2:14792/1‑150 CTTGGGGCTGCAAAGCGGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATC > 2:61859/1‑150 TTGGGGCTGCAAAGCGGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGT > 2:387613/1‑74 TTGGGGCTGCAAAGCGGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGT < 1:387613/74‑1 GGCTGCAAAGCGGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGG < 1:61859/150‑1 GCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATACGGGCG < 1:1916503/150‑1 CCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATACGGGCGG < 2:1229538/150‑1 CCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATACGG > 2:17732/1‑146 CCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATACGG < 1:17732/146‑1 CCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGACCACAGACGGTACACGGGCGGCGCTGTCCATCAGCGGGTCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATACGGGCGG > 1:1207004/1‑150 CCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATACGGGCGGG < 2:1837372/150‑1 CAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATACGGGCGGGCT > 1:1150564/1‑150 TGCCAGCGATTCGCAGCCGGCCAATACGTCACTTGAGCGCTTCAGCCACCAGCTGGAGCACGATGCGCAGATGGAAAGCGACACGCGGGTACCGGCCGTGGACAGCCTGGTCGGAAACAAAGGCTAAACGCCCTTGGGGCTGCAAAGCGGCCCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1946724‑1946569‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccaaGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATACGGGCGGGCT > NC_002947/1946592‑1946738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |