New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2219105 =	65 (0.890)	4 (0.060)	4/234	NT	6.1%	coding (1020/1161 nt)	PP_1959	hypothetical protein
	?	NC_002947	2219135 =	61 (0.890)					coding (990/1161 nt)	PP_1959	hypothetical protein

GAAAAAATCTATTTTAATCTTTATGAGATTGATCTATCGCATTTCCAGTTCATGCAACCATCATATGGAACATTAGTGGAGGCTTTCGCAAGTCGCGAAGCCGTAATGCGACTCAGAGATCGACTCCTGGTAGAGCATTTAGCGGAGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2219254‑2219105 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagtcgATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGAATAACTTTTA  >  NC_002947/2219135‑2219283                                                                                                                                                                                                                                                                                                             GAAAAAATCTATTTTAATCTTTATGAGATTGATCTATCGAATTTCCAGTTCATGCAACCATCATATGGAACATTAGTGGAGGCTTTCGCAAGTCGCGAAGCCGTAATGCGACTCAGAGATCGACTCCTGGTAGAGCATTTAGCGGAGTCG                                                                                                                                                       <  2:1579395/150‑1                                                                                                       GTAATGCGACTCAGAGATCGACTCCTGGTAGAGCATTTAGCGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAAT                                                                                                      <  1:768261/97‑1                                                                                                       GTAATGCGACTCAGAGATCGACTCCTGGTAGAGCATTTAGCGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAAT                                                                                                      >  2:768261/1‑97                                                                                                                           ACTCCTGGTAGAGCATTTAGCGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATG                                                                                         >  2:1885849/1‑90                                                                                                                           ACTCCTGGTAGAGAATTTAGCGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATG                                                                                         <  1:1885849/90‑1                                                                                                                                             ccagtatTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCTAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGAA           <  2:1576303/143‑1                                                                                                                                                GGAGTCGATCTCTGAGTCGCATTACAGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCACAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGAATAA        <  2:1298809/150‑1                                                                                                                                                 GAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGAATAAC       <  1:1145077/150‑1                                                                                                                                                      GATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGAATAACTTTTA  >  1:1142254/1‑150                                                                                                                                                                                                                                                                                                             GAAAAAATCTATTTTAATCTTTATGAGATTGATCTATCGCATTTCCAGTTCATGCAACCATCATATGGAACATTAGTGGAGGCTTTCGCAAGTCGCGAAGCCGTAATGCGACTCAGAGATCGACTCCTGGTAGAGCATTTAGCGGAGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2219254‑2219105 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagtcgATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGAATAACTTTTA  >  NC_002947/2219135‑2219283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.