New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2219105 =	65 (0.890)	4 (0.060)	4/234	NT	6.1%	coding (1020/1161 nt)	PP_1959	hypothetical protein
	?	NC_002947	2219135 =	61 (0.890)					coding (990/1161 nt)	PP_1959	hypothetical protein

CGCGTGCTTCGTGATATCGAAAGCAATTGAAGGAATAATTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGAATAACTTTTA  >  NC_002947/2218986‑2219283                                                                                                                                                      |                                                                                                                                                     cgcgTGCTTCGTGATATCGAAAGCAATTGAAGGAATAATTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGa                                                                                                                                                      <  2:339107/150‑1 (MQ=255)    gTGCTTCGTGATATCGAAAGCAATTGAAGGAATAATTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGAtct                                                                                                                                                   >  2:362524/1‑150 (MQ=255)        ttCGTATTATCGAAAGCAAGTGAATGAATAATTCGTTTGTATCTTTGGGAAGATCAAAATGCGTATCGTCTTCGGGCGCATACGGGATTGCTTTTGAGGTTTGCTCGCAACCCGAATCCGCTAAATGCTCTACCAGGAGTCGATCTCTGa                                                                                                                                               <  2:770269/150‑1 (MQ=255)            tGATATCGAAAGCAATTGAAGGAATAATTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCCCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCg                                                                                                                                           >  1:1801746/1‑150 (MQ=255)                    aaaGCAATTGAAGGAATAATTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACgg                                                                                                                                   >  1:640126/1‑150 (MQ=255)                    aaaGCAATTGAAGGAATAATTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACgg                                                                                                                                   >  1:75541/1‑150 (MQ=255)                    aaaGCAATTGAAGGAATAATTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACgg                                                                                                                                   >  2:1792583/1‑150 (MQ=255)                         aaTTGAAGGAATAATTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGGTCTCCTTGGAGTCGATCTCTGAGTCGCATTACGGCTTcg                                                                                                                              <  1:1424756/150‑1 (MQ=255)                            tGAAGGAATAATTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGa                                                                                                                           <  2:75541/150‑1 (MQ=255)                                ggAATAATTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTg                                                                                                                       >  1:414956/1‑150 (MQ=255)                                  aataatTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCg                                                                                                                     <  1:1091897/150‑1 (MQ=255)                                      atTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGa                                                                                                                                               <  2:1151376/120‑1 (MQ=255)                                      atTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGa                                                                                                                                               >  1:1151376/1‑120 (MQ=255)                                      atTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAg                                                                                                                 <  2:1367739/150‑1 (MQ=255)                                       ttCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTGGCAACCCGACTCCGCTGAATGCTCTACCAGGAGTCGAGCTCTGAGTCGCATTACGGGTTTTGGAGTTGCGAAAGc                                                                                                                >  1:584956/1‑150 (MQ=255)                                       ttCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGa                                                                                                                           >  2:691481/1‑139 (MQ=255)                                       ttCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGa                                                                                                                           <  1:691481/139‑1 (MQ=255)                                       ttCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGc                                                                                                                <  2:414956/150‑1 (MQ=255)                                       ttCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGc                                                                                                                >  2:994093/1‑150 (MQ=255)                                               tATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTa                                                                                                        >  1:451159/1‑150 (MQ=255)                                                 tCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAAt                                                                                                      >  2:167413/1‑150 (MQ=255)                                                   tttGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATg                                                                                                     <  2:625010/149‑1 (MQ=255)                                                   tttGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATg                                                                                                     >  1:625010/1‑149 (MQ=255)                                                      gagaAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTcc                                                                                                 <  2:451159/150‑1 (MQ=255)                                                           gaTCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATatg                                                                                            >  1:1258120/1‑150 (MQ=255)                                                            aTCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATatga                                                                                           >  2:554254/1‑150 (MQ=255)                                                               aaaaTGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATgg                                                                                        <  2:99577/150‑1 (MQ=255)                                                               aaaaTGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATgg                                                                                        >  1:1519561/1‑150 (MQ=255)                                                                 aaTGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGGCTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGtt                                                                                      <  2:64885/150‑1 (MQ=255)                                                                       attagtggaggctttcgcaagtcgcgaagccgtaatgcgactcagagatCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTAc                                                                                                                                     <  1:768261‑M1/48‑1 (MQ=255)                                                                       attagtggaggctttcgcaagtcgcgaagccgtaatgcgactcagagatCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTAc                                                                                                                                     >  2:768261‑M1/50‑97 (MQ=255)                                                                                    cgcATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGa                                                                   <  1:167413/150‑1 (MQ=255)                                                                                      cATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATa                                                                 <  2:640126/150‑1 (MQ=255)                                                                                       aTGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATatgatg                                                                                         >  1:506117/1‑125 (MQ=255)                                                                                       aTGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATatgatg                                                                                         <  2:506117/125‑1 (MQ=255)                                                                                        tGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATatgatg                                                                                         <  2:1659747/124‑1 (MQ=255)                                                                                        tGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATatgatg                                                                                         >  1:1659747/1‑124 (MQ=255)                                                                                             tAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAAt                                                          >  2:1255368/1‑150 (MQ=255)                                                                                               aTGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCGTTACGGCTTCGCGACTTGCGAAAGCCTc                                                                                                             <  2:1811793/97‑1 (MQ=255)                                                                                               aTGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTc                                                                                                             >  1:1811793/1‑97 (MQ=255)                                                                                               aTGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGaa                                                                               >  1:970352/1‑127 (MQ=255)                                                                                               aTGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGaa                                                                               <  2:970352/127‑1 (MQ=255)                                                                                               aTGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAAtct                                                        >  2:1067598/1‑150 (MQ=255)                                                                                                  cTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCAt                                                     <  2:1096587/150‑1 (MQ=255)                                                                                                   ttttGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCa                                                                                                                                         >  2:1095817/1‑65 (MQ=255)                                                                                                   ttttGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCa                                                                                                                                         <  1:1095817/65‑1 (MQ=255)                                                                                                   ttttGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGc                                                                     <  1:140810/133‑1 (MQ=255)                                                                                                   ttttGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGc                                                                     >  2:140810/1‑133 (MQ=255)                                                                                                      gtaatgcgactcagagatcgactcctggtagagcatttagcggagtcgATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAAt                                                                                                      >  2:768261‑M2/49‑97 (MQ=255)                                                                                                      gtaatgcgactcagagatcgactcctggtagagcatttagcggagtcgATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAAt                                                                                                      <  1:768261‑M2/49‑1 (MQ=255)                                                                                                        aGGTCTGCCCCCAACCCGACTGCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCTAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGAt                                               <  2:822393/150‑1 (MQ=255)                                                                                                            cTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTaaa                                           <  1:720043/150‑1 (MQ=255)                                                                                                               cTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATa                                        >  2:1353748/1‑150 (MQ=255)                                                                                                                  gCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTTGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAAtc                                                         >  1:726160/1‑130 (MQ=255)                                                                                                                  gCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGaa                                                                         >  1:1517584/1‑114 (MQ=255)                                                                                                                  gCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGaa                                                                         <  2:1517584/114‑1 (MQ=255)                                                                                                                  gCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAAtc                                                         <  2:726160/130‑1 (MQ=255)                                                                                                                    aaCCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATaaa                                                  <  1:1074511/135‑1 (MQ=255)                                                                                                                    aaCCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATaaa                                                  >  2:1074511/1‑135 (MQ=255)                                                                                                                      cccGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGAttttt                                 <  1:994093/150‑1 (MQ=255)                                                                                                                        CGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATTCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTc                               <  2:1579395‑M1/150‑1 (MQ=255)                                                                                                                          actcctggtagagcatttagcggagtcgATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATatgatg                                                                                         >  2:1885849‑M2/29‑90 (MQ=255)                                                                                                                          actcctggtagagaatttagcggagtcgATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATatgatg                                                                                         <  1:1885849‑M2/62‑1 (MQ=255)                                                                                                                               gCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCTATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAAc                        <  1:1792583/150‑1 (MQ=255)                                                                                                                               gCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGAt                                                                  <  2:825525/108‑1 (MQ=255)                                                                                                                               gCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGAt                                                                  >  1:825525/1‑108 (MQ=255)                                                                                                                                       ctctACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGcc                >  1:1465095/1‑150 (MQ=255)                                                                                                                                        tctACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCt               >  2:1145077/1‑150 (MQ=255)                                                                                                                                         ctACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTg              <  1:362524/150‑1 (MQ=255)                                                                                                                                         ctACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTg              <  1:1353748/150‑1 (MQ=255)                                                                                                                                          tACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACt                                                                             >  2:1367711/1‑86 (MQ=255)                                                                                                                                          tACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACt                                                                             <  1:1367711/86‑1 (MQ=255)                                                                                                                                          tACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTgg             <  1:554254/150‑1 (MQ=255)                                                                                                                                          tACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTgg             <  2:1258120/150‑1 (MQ=255)                                                                                                                                          tACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTgg             <  2:1519561/150‑1 (MQ=255)                                                                                                                                           aCCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATa                                                                 >  2:721676/1‑97 (MQ=255)                                                                                                                                           aCCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATa                                                                 <  1:721676/97‑1 (MQ=255)                                                                                                                                           aCCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGa            >  1:358112/1‑150 (MQ=255)                                                                                                                                            ccagtattcgATCTCTGAGTCGCATTACGGCTTCGCGACTTGCTAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGaa           <  2:1576303‑M2/140‑1 (MQ=255)                                                                                                                                            ccAGGAGTCGATCTTTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGc                                                                     >  1:1246892/1‑92 (MQ=255)                                                                                                                                            ccAGGAGTCGATCTTTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGc                                                                     <  2:1246892/92‑1 (MQ=255)                                                                                                                                            ccAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGaa           <  2:614151/150‑1 (MQ=255)                                                                                                                                               ggagtcgATCTCTGAGTCGCATTACAGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCACAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGAATaa        <  2:1298809‑M2/143‑1 (MQ=255)                                                                                                                                                gagtcgATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGAATAAc       <  1:1145077‑M2/144‑1 (MQ=255)                                                                                                                                                     gATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGAATAACTTTTa  >  1:1142254‑M2/2‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CGCGTGCTTCGTGATATCGAAAGCAATTGAAGGAATAATTCGTTTGTATCTTTGAGAAGATCAAAATGCGTATCGTCTTCGGGCGCATGAGCTAATGCTTTTGAGGTCTGCTCGCAACCCGACTCCGCTAAATGCTCTACCAGGAGTCGATCTCTGAGTCGCATTACGGCTTCGCGACTTGCGAAAGCCTCCACTAATGTTCCATATGATGGTTGCATGAACTGGAAATGCGATAGATCAATCTCATAAAGATTAAAATAGATTTTTTCCATTAACGCCAAGCCTGGAATAACTTTTA  >  NC_002947/2218986‑2219283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.