| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2366860 = | 62 (0.850) | 5 (0.070) | 5/236 | NT | 8.1% | coding (196/459 nt) | PP_2079 | hypothetical protein |
| ? | NC_002947 | 2366889 = | 54 (0.780) | coding (167/459 nt) | PP_2079 | hypothetical protein | |||||
CGTTTATGCCTGTACGCAAGACTGTCAGAATTCCCTTCCGTTTCCTTTGACCCGAGCCTGCTCATGCAAATCAACACCGCCCTGCTGTTCGCCACCCCTTGCGATGACGAGGAAGACAACATGGCGACCC‑TGT‑GCTGCCACAGCGACAAGGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2367013‑2366860‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggtcGCCATGTTGTCTTCCTCGTCATCGCAAGGGGTGGCGAACAGCAGGGCGGTGTTGATTTGCATGAGCAGGCTCGGGTCAAAGGAAACGGAAGGGAATTCTGACAGTCTTGCGTACAGGCATAAACGTAAAGTTACCGCCCCTTGACCGAA > NC_002947/2366889‑2367037 CGTTTATGCCTGTACGCAAGACTGTCAGAATTCCCTTCCGTTTCCTTTGACCCGAGCCTGCTCATGCAAATCAACACCGCCCTGCTGTTCGCCACCCCTTGCGATGACGAGGAAGACAACATGGCGACCC‑TGT‑GCTGCCACAGCGACAAG > 1:1857362/1‑150CGTTTATGCCTGTACGCAAGACTGTCAGAATTCCCTTCCGTTTCCTTTGACCCGAGCCTGCTCATGCAAATCAACACCGCCCTGCTGTTCGCCACCCCTTGCGATGACGAGGAAGACAACATGGCGACCC‑TGT‑GCTGCCACAGCGACAAG < 2:1721452/150‑1 GTTTATGCCTGTACGCAAGACTGTCAGAATTCCCTTCCGTTTCCTTTGACCCGAGCCTGCTCATGCAAATCAACACCGCCCTGCTGTTCGCCACCCCTTGCGATGACGAGGAAGACAACATGGCGACCC‑TGT‑GCTGCCACAGCGACAAGG < 1:967575/150‑1 TCAGAATTCCCTTCCGTTTCCTTTGACCCGAGCCTGCTCATGCAAATCAACACCGCCCTGCTGTTCGCCACCCCTTGCGATGACGAGGAAGACAACATGGCGACCCTTGTCGCTGTGGCAGC‑AC‑AGGGTCGCCATGTTGTCTTC < 1:462100/144‑1 TCAGAATTCCCTTCCGTTTCCTTTGACCCGAGCCTGCTCATGCAAATCAACACCGCCCTGCTGTTCGCCACCCCTTGCGATGACGAGGAAGACAACATGGCGACCCTTGTCGCTGTGGCAGC‑AC‑AGGGTCGCCATGTTGTCTTC > 2:462100/1‑144 TGGCGACCC‑TGT‑GCTGCCACAGCGACAAGGGTCGCCATGTTGTCTTCCTCGTCATCGCAAGGGGTGGCGAACAGCAGGGCGGTGTTGATTTGCATGAGCAGGCTCGGGTCAAAGGAAAC < 1:76244/119‑1 TGGCGACCC‑TGT‑GCTGCCACAGCGACAAGGGTCGCCATGTTGTCTTCCTCGTCATCGCAAGGGGTGGCGAACAGCAGGGCGGTGTTGATTTGCATGAGCAGGCTCGGGTCAAAGGAAAC > 2:76244/1‑119 CACAGCGACAAGGGTCGCCATGTTGTCTTCCTCGTCATCGCAAGGGGTGGCGAACAGCAGGGCGGTGTTGCTTTCCATGAGCAGACTCGGGTCAGGGGGAAGGGATGGTGATTCTGACAGTCTTGCGTACAGGCATAAACGTAAAGTTAC > 2:1187695/1‑150 GGGTCGCCATGTTGTCTTCCTCGTCATCGCAAGGGGTGGCGAACAGCAGGGCGGTGTTGATTTGCATGAGCAGGCTCGGGTCAAAGGAAACGGAAGGGAATTCTGACAGTCTTGCGTACAGGCATAAACGTAAAGTTACCGCCCCTTGAC < 1:1616574/150‑1 GGGTCGCCATGTTGTCTTCCTCGTCATCGCAAGGGGTGGCGAACAGCAGGGCGGTGTTGATTTGCATGAGCAGGCTCGGGTCAAAGGAAACGGAAGGGAATTCTGACAGTCTTGCGTACAGGCATAAACGTAAAGTTACCGCCCCTTGAC < 2:967575/150‑1 CGCCATGTTGTCTTCCTCGTCATCGCAAGGGGTGGCGAACAGCAGGGCGGTGTTGATTTGCATGAGCAGGCTCGGGTCAAAGGAAACGGAAGGGAATTCTGACAGTCTTGCGTACAGGCATAAACGTAAAGTTACCGCCCCTTGACCGAA < 1:414265/150‑1 CGTTTATGCCTGTACGCAAGACTGTCAGAATTCCCTTCCGTTTCCTTTGACCCGAGCCTGCTCATGCAAATCAACACCGCCCTGCTGTTCGCCACCCCTTGCGATGACGAGGAAGACAACATGGCGACCC‑TGT‑GCTGCCACAGCGACAAGGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2367013‑2366860‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggtcGCCATGTTGTCTTCCTCGTCATCGCAAGGGGTGGCGAACAGCAGGGCGGTGTTGATTTGCATGAGCAGGCTCGGGTCAAAGGAAACGGAAGGGAATTCTGACAGTCTTGCGTACAGGCATAAACGTAAAGTTACCGCCCCTTGACCGAA > NC_002947/2366889‑2367037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |