| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2396082 = | 65 (0.890) | 4 (0.060) | 4/240 | NT | 5.2% | coding (3618/3636 nt) | PP_2100 | two‑component system sensor protein |
| ? | NC_002947 | 2396139 = | 84 (1.190) | coding (3561/3636 nt) | PP_2100 | two‑component system sensor protein | |||||
GCCCCTGACCTGATGGCGGCCTGTGAAGCCCTCGAGGCCAGCGACTTGCCCACTGCCCAGGTGCGCCTGCGGCGCCAGGCACTGGCACGGCATATGTGCCGAGTGGAACGTGCCCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2396234‑2396082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaCATATGCCGTGCCAGTGCCTGGCGCCGCAGGCGCACCTGGGCAGTGGGCAAGTCGCTGGCCTCGAGGGCTTCACAGGCCGCCATCAGGTCAGGGGCTTCCAGCATGCGCGCGGCGCTGAGCACCTTGTGG > NC_002947/2396139‑2396268 GCCCCTGACCTGATGGCGGCCTGTGAAGCCCTCGAGGCCAGCGACTTGCCCACTGCCCAGGTGCGCCTGCGGCGCCAGGCACTGGCACGGCATATGTGCCGAGTGGAACGTGCCCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAG < 1:1040860/150‑1 CCCCTGACCTGATGGCGGCCTGTGAAGCCCTCGAGGCCAGCGACTTGCCCACTGCCCAGGTGCGCCTGCGGCGCCAGGCACTGGCACGGCATATGTGCCGAGTGGAACGTGCCCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAGG < 1:1519434/150‑1 CTGATGGCGGCCTGTGAAGCCCTCGAGGCCAGCGACTTGCCCACTGCCTAGGTGCGCCTGCGGCGCCAGGCACTGGCACGGCATATGTGCCGAGTGGAACGTGCCCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAGG < 1:343944/142‑1 CTGATGGCGGCCTGTGAAGCCCTCGAGGCCAGCGACTTGCCCACTGCCTAGGTGCGCCTGCGGCGCCAGGCACTGGCACGGCATATGTGCCGAGTGGAACGTGCCCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAGG > 2:343944/1‑142 GCACGGCATATGTGCCGAGTGGAACGTGCCCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAGGC < 1:1227996/68‑1 GCACGGCATATGTGCCGAGTGGAACGTGCCCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAGGC > 2:1227996/1‑68 TGTGCCGAGTGGAACGTGCCCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAGGCACATATGCCGTGCCAGTGCCTGGCGCCGCAGGCGCACCTGGGCAGTGGGCAAGTCGCTGGCCTCGAGGGCTTCACAGGCCGCCATCAGGTCA > 2:1515085/1‑150 TGCCGAGTGGAACGTGCCCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAGGCACATATGCCGTGCCAGTGCCTGGCGCCGCAGGCGCACCTGGGCAGTGGGCAAGTCGCTGGCCTCGAGGGCTTCACAGGCCGCCATCAGGTCAGG < 1:1515085/150‑1 CCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAGGCACATATGCCGTGCCAGTGCCTGGCGCCGCAGGCGCACCTGGGCAGTGGGCAAGTCGCTGGCCTCGAGGGCTTCACAGGCCGCCATCA > 1:1814262/1‑126 CCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAGGCACATATGCCGTGCCAGTGCCTGGCGCCGCAGGCGCACCTGGGCAGTGGGCAAGTCGCTGGCCTCGAGGGCTTCACAGGCCGCCATCA < 2:1814262/126‑1 GCACATATGCCGTGCCAGTGCCTGGCGCCGCAGGCGCACCTGGGCAGTGGGCAAGTCGCTGGCCTCGAGGGCTTCACAGGCCGCCATCAGGTCAGGGGCTTCCAGCATGCGCGCGGCGCTGAGCACCTTGTGG > 1:1742739/1‑133 GCACATATGCCGTGCCAGTGCCTGGCGCCGCAGGCGCACCTGGGCAGTGGGCAAGTCGCTGGCCTCGAGGGCTTCACAGGCCGCCATCAGGTCAGGGGCTTCCAGCATGCGCGCGGCGCTGAGCACCTTGTGG < 2:1742739/133‑1 GCCCCTGACCTGATGGCGGCCTGTGAAGCCCTCGAGGCCAGCGACTTGCCCACTGCCCAGGTGCGCCTGCGGCGCCAGGCACTGGCACGGCATATGTGCCGAGTGGAACGTGCCCTGGCCAAGGAATTGGCCACAAGCACGGATACTCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2396234‑2396082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaCATATGCCGTGCCAGTGCCTGGCGCCGCAGGCGCACCTGGGCAGTGGGCAAGTCGCTGGCCTCGAGGGCTTCACAGGCCGCCATCAGGTCAGGGGCTTCCAGCATGCGCGCGGCGCTGAGCACCTTGTGG > NC_002947/2396139‑2396268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |