| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2954675 | 96 (1.320) | 10 (0.150) | 10/226 | NT | 10.1% | intergenic (‑135/‑146) | PP_2586/PP_2587 | putative amino acid transporter/LuxR family transcriptional regulator |
| ? | NC_002947 | = 2954738 | 91 (1.370) | intergenic (‑198/‑83) | PP_2586/PP_2587 | putative amino acid transporter/LuxR family transcriptional regulator | |||||
TGTACTTGTTGTTGTATGCATTGCTAACTCCTGAAAAGGGATGCAGGACACCGCGGCAGGCGAGCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCA‑CC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2954520‑2954675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcaggca‑ccGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACACCTGACGGTCG < NC_002947/2954738‑2954592 TGTACTTGTTGTTGTATGCATTGCTAACTCCTGAAAAGGGATGCAGGACACCGCGGCAGGCGAGCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCA > 1:1349116/1‑150TGTACTTGTTGTTGTATGCATTGCTAACTCCTGAAAAGGGATGCAGGACACCGCGGCAGGCGAGCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCA > 2:70753/1‑150 GTACTTGTTGTTGTATGCATTGCTAACTCCTGAAAAGGGATGCCGGACCCCGCGGCAGGCGAGCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAG < 2:356169/150‑1 GTACTTGTTGTTGTATGCATTGCTAACTCCTGAAAAGGGATGCAGGACACCGCGGCAGGCGAGCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAG > 2:1640541/1‑150 TACTTGTTGTTGTATGCATTGCTAACTCCTGAAAAGGGATGCAGGACACCGCGGCAGGCGAGCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCTAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGG > 1:427498/1‑150 GTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGG > 2:1465056/1‑133 GTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGG < 1:1465056/133‑1 TCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCAC < 1:452070/125‑1 TCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCAC > 2:452070/1‑125 TTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACC > 2:1466777/1‑118 TTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACC < 1:1466777/118‑1 AAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCC > 2:1074805/1‑114 AAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCC < 1:1074805/114‑1 GAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAG < 1:1148752/104‑1 GAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAG > 2:1148752/1‑104 CTGCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAA < 2:455884/101‑1 CTGCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAA > 1:455884/1‑101 TGCAGGCA‑CCGGAAACACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGT < 2:620908/89‑1 TGCAGGCA‑CCGGAAACACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGAGCCTGCAGGGTGT > 1:620908/1‑89 GCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACACCTGA < 2:971819/150‑1 GCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACACCTGA < 1:1745726/150‑1 GCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGA < 1:684291/117‑1 GCAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGA > 2:684291/1‑117 CAGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACACCTGAC < 1:1767205/150‑1 AGGCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACACCTGACG > 1:818929/1‑150 GCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACACCTGACGGT > 2:389970/1‑150 GCA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACACCTGACGGT > 1:139947/1‑150 CA‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACACCTGACGGTC < 1:216675/150‑1 A‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCGCAACACCTGACGGTCG > 1:716212/1‑150 A‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACACCTGACGGTCG > 1:903371/1‑150 A‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACACCTGACGGTCG > 1:1634288/1‑150 A‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTC < 2:1538812/117‑1 A‑CCGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTC > 1:1538812/1‑117 CGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACAC < 2:1704964/138‑1 CGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACAC > 1:1704964/1‑138 TGTACTTGTTGTTGTATGCATTGCTAACTCCTGAAAAGGGATGCAGGACACCGCGGCAGGCGAGCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCA‑CC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2954520‑2954675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcaggca‑ccGGAATCACCCTTTGGGGTGAGCCGGGCAAGGGCTGTGTCCGCTCACCCCAAAGGGTGATTCCGGGTGCCTGCAGGGTGTGGGAGCATCAACCCGCCCCAGCGCTGCGAGCTTTCCGCTCGACCTCCTTGCACAACACCTGACGGTCG < NC_002947/2954738‑2954592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |