| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3359306 | 63 (0.860) | 4 (0.060) | 4/226 | NT | 5.8% | coding (420/912 nt) | PP_2955 | CorA family magnesium/cobalt transporter |
| ? | NC_002947 | = 3359316 | 73 (1.100) | coding (410/912 nt) | PP_2955 | CorA family magnesium/cobalt transporter | |||||
GTGTTTCTGGCCATGGCTGCGCAGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGGGCCACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3359147‑3359306‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccacctgcGGGTGGTAAAGCAGGTGGCCCGCGAAATCCAGCTGCAGTTCGATCGGTCCATGGACAACCAGCACCTGGTGCAGATGTACAGCCTTAGCGAAAGCCTGGTGTATTACGTCAACGCCATTCAAAGCAATGGCGCCGTGCTAGCC < NC_002947/3359316‑3359174 GTGTTTCTGGCCATGGCTGCGCAGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCG > 2:88802/1‑150GTGTTTCTGGCCATGGCTGCGCAGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCG > 2:470016/1‑150GTGTTTCTGGCCATGGCTGCGCAGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACAAAAGGATGTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCG > 1:234487/1‑150 TGTTTCTGGCCATGGCTGCGCAGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGG < 2:197030/150‑1 GTTTCTGGCCATGGCTGCGCAGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGGG < 1:470016/150‑1 CTGGCCATGGCTGCGCAGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGGGCCAC < 1:1663077/150‑1 GGCCATGGCTGCGCAGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGGGCCACCT < 1:779636/150‑1 GCCATGGCTGCGCAGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGGGCCACCTG > 2:90901/1‑150 CCATGGCTGCGCAGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGGGCCACCTGC > 2:1685835/1‑150 AGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGGGCCACCTGCGGGTGGTAAAGC > 1:1632153/1‑150 TGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGGGCCACCTGCGGGTGGTAAAGCAGGTGGCCCGCGAAATCCAGCT < 2:1632153/150‑1 ATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGGGCCACCTGCGGGTGGTAAAGCAGGTGGCCCGC < 2:1040680/89‑1 ATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGGGCCACCTGCGGGTGGTAAAGCAGGTGGCCCGC > 1:1040680/1‑89 GCCACCTGCGGGTGGTAAAGCAGGTGGCCCGCGAAATCCAGCTGCAGTTCGATCGGTCCATGGACAACCAGCACCTGGTGCAGATGTACAGCCTTAGCGAAAGCCTGGTGTATTACGTCAACGCCATTCAAAGCAATGGCGCCGTGCTAG > 2:1569475/1‑150 CCACCTGCGGGTGGTAAAGCAGGTGGCCCGCGAAATCCAGCTGCAGTTCGATCGGTCCATGGACAACCAGCACCTGGTGCAGATGTACAGCCTTAGCGAAAGCCTGGTGTATTACGTCAACGCCATTCAAAGCAATGGCGCCGTGCTAGC < 1:1569475/150‑1 CACCTGCGGGTGGTAAAGCAGGTGGCCCGCGAAATCCAGCTGCAGTTCGATCGGTCCATGGACAACCAGCACCTGGTGCAGATGTACAGCCTTAGCGAAAGCCTGGTGTATTACGTCAACGCCATTCAAAGCAATGGCGCCGTGCTAGCC > 1:605275/1‑150 CACCTGCGGGTGGTAAAGCAGGTGGCCCGCGAAATCCAGCTGCAGTTCGATCGGTCCATGGACAACCAGCACCTGGTGCAGATGTACAGCCTTAGCGAAAGCCTGGTGTATTACGTCAACGCCATTCAAAGCAATGGCGCCGTGCTAGCC < 1:491424/150‑1 CTGCGGGTGGTAAAGCAGGTGGCCCGCGAAATCCAGCTGC > 2:11298/1‑40 CTGCGGGTGGTAAAGCAGGTGGCCCGCGAAATCCAGCTGC < 1:11298/40‑1 GTGTTTCTGGCCATGGCTGCGCAGCAGGGCTAGCACGGCGCCATTGCTTTGAATGGCGTTGACGTAATACACCAGGCTTTCGCTAAGGCTGTACATCTGCACCAGGTGCTGGTTGTCCATGGACCGATCGAACTGCAGCTGGATTTCGCGGGCCACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3359147‑3359306‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccacctgcGGGTGGTAAAGCAGGTGGCCCGCGAAATCCAGCTGCAGTTCGATCGGTCCATGGACAACCAGCACCTGGTGCAGATGTACAGCCTTAGCGAAAGCCTGGTGTATTACGTCAACGCCATTCAAAGCAATGGCGCCGTGCTAGCC < NC_002947/3359316‑3359174 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |