New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3676073	55 (0.750)	5 (0.080)	5/220	NT	8.6%	intergenic (+37/+55)	PP_3240/PP_5592	hypothetical protein/hypothetical protein
	?	NC_002947	= 3676096	57 (0.880)					intergenic (+60/+32)	PP_3240/PP_5592	hypothetical protein/hypothetical protein

GCCGAGCAGGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3675914‑3676073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccggcaagcTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGGTCG  <  NC_002947/3676096‑3675949                                                                                                                                                                                                                                                                                                                      GCCGAGTAGGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTC                                                                                                                                                                <  1:1449016/150‑1          GCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAG                                                                                                                                                       >  1:270330/1‑150          GCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAG                                                                                                                                                       >  2:127349/1‑150                                             CTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCG                                                                                                                    <  1:127349/150‑1                                                                              ACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCC                                                                                                                        >  1:1032194/1‑113                                                                              ACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCC                                                                                                                        <  2:1032194/113‑1                                                                                                                           AACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGA                                                                                                                   <  1:806694/73‑1                                                                                                                           AACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGA                                                                                                                   >  2:806694/1‑73                                                                                                                                               GTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCC                                                 <  1:393359/119‑1                                                                                                                                               GTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCC                                                 >  2:393359/1‑119                                                                                                                                                   CGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGG              <  2:186652/150‑1                                                                                                                                                    GTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTC                                                                                    >  1:1356954/1‑79                                                                                                                                                    GTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTC                                                                                    <  2:1356954/79‑1                                                                                                                                                            CAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGG     >  2:1856114/1‑150                                                                                                                                                               GCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGGTCG  >  2:604830/1‑150                                                                                                                                                                                                                                                                                                                      GCCGAGCAGGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3675914‑3676073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccggcaagcTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGGTCG  <  NC_002947/3676096‑3675949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.