New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3676073	55 (0.750)	5 (0.080)	5/220	NT	8.6%	intergenic (+37/+55)	PP_3240/PP_5592	hypothetical protein/hypothetical protein
	?	NC_002947	= 3676096	57 (0.880)					intergenic (+60/+32)	PP_3240/PP_5592	hypothetical protein/hypothetical protein

CGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCAC  >  NC_002947/3675925‑3676220                                                                                                                                                     |                                                                                                                                                     cGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGcc                                                                                                                                                     >  1:1883458/1‑150 (MQ=255)  gATAAAAAGGCCGAACTTGGTTTAGACCCCGACACCCCGGATGCCGAAAACCCTCAAGACCACCCACAGGGGCCGGCCAAGCCGCCTAAAAAAAAAAAAAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCa                                                                                                                                                    <  2:400973/150‑1 (MQ=255)   aTAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGAACCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCAt                                                                                                                                                   <  1:909610/150‑1 (MQ=255)     aaaaaGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCAtgt                                                                                                                                                 <  2:270330/150‑1 (MQ=255)        aaGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCg                                                                                                                                              <  2:1883458/150‑1 (MQ=255)              gACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCt                                                                                                                                        >  1:384639/1‑150 (MQ=255)               aCCTTGGTTTCAGCCCAGCCTCCACGACTACCGTAGGCCCGTCATTCGACCCACAGGGTCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCtt                                                                                                                                       <  2:18442/150‑1 (MQ=255)                ccTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTg                                                                                                                                      <  2:1002076/150‑1 (MQ=255)                 cTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCAACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTgg                                                                                                                                     <  2:1187458/150‑1 (MQ=255)                      tttCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAAcc                                                                                                                                >  2:1595751/1‑150 (MQ=255)                         cGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgc                                                                                                                             >  2:604830‑M2/1‑148 (MQ=255)                            ccccGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttg                                                                                                                          >  2:1856114‑M2/1‑145 (MQ=255)                                  cTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggcttgccggcg                                                                                                                    <  1:127349‑M1/150‑35 (MQ=255)                                     cccGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacg                                                                                                                 <  2:186652‑M2/150‑15 (MQ=255)                                        ggATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTc                                                                                                              <  1:1252389/150‑1 (MQ=255)                                          aTGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGGGTAGCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTcac                                                                                                            <  1:821410/150‑1 (MQ=255)                                              cGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACcaca                                                                                                        >  2:1481831/1‑150 (MQ=255)                                               gAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAg                                                                                                       >  2:332557/1‑150 (MQ=255)                                                aaGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAga                                                                                                      <  1:567405/150‑1 (MQ=255)                                                     ccTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACt                                                                                                 >  2:1578103/1‑150 (MQ=255)                                                      cTCAAGTCGACCCACAGGGGCCGGCCAAGCCTGCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTTCGATCTTTTGTGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTg                                                                                                >  2:1390214/1‑150 (MQ=255)                                                      cTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTg                                                                                                <  1:1466520/150‑1 (MQ=255)                                                       tCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGt                                                                                               <  1:1595751/150‑1 (MQ=255)                                                           gTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCATCACAGACGACTGTCAGc                                                                                           <  1:1181249/150‑1 (MQ=255)                                                                 ccACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATccc                                                                                                                                         >  2:1423443/1‑98 (MQ=255)                                                                 ccACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATccc                                                                                                                                         <  1:1423443/98‑1 (MQ=255)                                                                 ccACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTc                                                                                              >  1:1746587/1‑141 (MQ=255)                                                                 ccACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTc                                                                                              <  2:1746587/141‑1 (MQ=255)                                                                   acaGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggcttgcc                                                                                                                        <  2:1032194‑M1/113‑31 (MQ=255)                                                                   acaGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggcttgcc                                                                                                                        >  1:1032194‑M1/1‑83 (MQ=255)                                                                    caGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAgcgc                                                                                  <  1:1578103/150‑1 (MQ=255)                                                                    caGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAgcgc                                                                                  <  1:327922/150‑1 (MQ=255)                                                                      ggggCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAgcgcgc                                                                                <  2:255300/150‑1 (MQ=255)                                                                       gggCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGcc                                                                               >  2:328402/1‑150 (MQ=255)                                                                        ggccggccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagac                                                                                                             >  2:393359‑M2/1‑101 (MQ=255)                                                                        ggccggccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagac                                                                                                             <  1:393359‑M2/119‑19 (MQ=255)                                                                            ggccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTg‑gcg                                                                         <  2:384639/150‑1 (MQ=255)                                                                            ggccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTg‑gcg                                                                         >  2:106546/1‑150 (MQ=255)                                                                                           agaCATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTAcgcccgcc                                                          >  1:1653738/1‑150 (MQ=255)                                                                                           agaCATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTAcgcccgc                                                           >  2:1258125/1‑149 (MQ=255)                                                                                           agaCATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGAGCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTAcgcccgc                                                           <  1:1258125/149‑1 (MQ=255)                                                                                               aTTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTg                                                                             >  1:136115/1‑128 (MQ=255)                                                                                               aTTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTg                                                                             <  2:136115/128‑1 (MQ=255)                                                                                                      aaaaGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCctct                                                                   <  1:1076294/130‑1 (MQ=255)                                                                                                      aaaaGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCctct                                                                   >  2:1076294/1‑130 (MQ=255)                                                                                                       aaaGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCTGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTg                                              >  1:1853698/1‑150 (MQ=255)                                                                                                       aaaGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTg                                              >  1:76149/1‑150 (MQ=255)                                                                                                          ggAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATc                                           <  1:1481831/150‑1 (MQ=255)                                                                                                           gAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgac                                                                                                                  <  2:1356954‑M2/79‑14 (MQ=255)                                                                                                           gAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgac                                                                                                                  >  1:1356954‑M2/1‑66 (MQ=255)                                                                                                            aGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCgg                                         <  1:332557/150‑1 (MQ=255)                                                                                                            aGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCgg                                         >  2:386781/1‑150 (MQ=255)                                                                                                             gTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCggg                                        <  2:76149/150‑1 (MQ=255)                                                                                                                aaCCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggcttgccggcga                                                                                                                   >  2:806694‑M1/1‑38 (MQ=255)                                                                                                                aaCCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggcttgccggcga                                                                                                                   <  1:806694‑M1/73‑36 (MQ=255)                                                                                                                aaCCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTcac                                                                                                            >  1:70295/1‑80 (MQ=255)                                                                                                                aaCCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTcac                                                                                                            <  2:70295/80‑1 (MQ=255)                                                                                                                 aCCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGCAGGCGACCACAGACGACAGTAAAACATCA‑CACGTCTGAACTGCCGTTACTCCCGCCGCCGACAGCTTGATCGGGTAGt                                    >  1:917828/1‑150 (MQ=255)                                                                                                                  ccACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACAAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTg                                   >  2:752801/1‑150 (MQ=255)                                                                                                                   cACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGc                                  >  2:1913683/1‑150 (MQ=255)                                                                                                                       gCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGc                              <  1:106546/150‑1 (MQ=255)                                                                                                                         cTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCAGACAGCTTGATCGGGTAGTGCACGCTg                            >  2:168941/1‑150 (MQ=255)                                                                                                                            gATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGACCGGGTAGTGCACGCTGATc                         >  2:1280553/1‑150 (MQ=255)                                                                                                                                aCCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGt                     <  1:707225/150‑1 (MQ=255)                                                                                                                                 ccGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTg                    >  1:1705793/1‑150 (MQ=255)                                                                                                                                  cGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCa                                                                                             <  2:761071/77‑1 (MQ=255)                                                                                                                                  cGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCa                                                                                             >  1:761071/1‑77 (MQ=255)                                                                                                                                    gTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcc                                                 <  1:393359‑M1/119‑102 (MQ=255)                                                                                                                                    gTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcc                                                 >  2:393359‑M1/1‑18 (MQ=255)                                                                                                                                        cgtcgCCGGCAAGCtggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggg              <  2:186652‑M1/150‑137 (MQ=255)                                                                                                                                        cgtcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTg             <  1:328402/150‑1 (MQ=255)                                                                                                                                         gtcgCCGGCAAGCtggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactc                                                                                    <  2:1356954‑M1/79‑67 (MQ=255)                                                                                                                                         gtcgCCGGCAAGCtggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactc                                                                                    >  1:1356954‑M1/1‑13 (MQ=255)                                                                                                                                          tcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtt                                                                                         >  2:806694‑M2/1‑35 (MQ=255)                                                                                                                                          tcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtt                                                                                         <  1:806694‑M2/73‑39 (MQ=255)                                                                                                                                          tcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTg                       <  2:1276546/138‑1 (MQ=255)                                                                                                                                          tcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTg                       >  1:1276546/1‑138 (MQ=255)                                                                                                                                           cgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggag           <  1:127349‑M2/150‑117 (MQ=255)                                                                                                                                             ccGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTAc        <  1:1586490/150‑1 (MQ=255)                                                                                                                                               ggCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgt                                            <  2:1032194‑M2/113‑84 (MQ=255)                                                                                                                                               ggCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgt                                            >  1:1032194‑M2/1‑30 (MQ=255)                                                                                                                                                 cAAGCtggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggagtcgggg     >  2:1856114‑M1/1‑5 (MQ=255)                                                                                                                                                    gCtggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggagtcggggtcg  >  2:604830‑M1/1‑2 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTG‑GCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCAC  >  NC_002947/3675925‑3676220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.