| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3830168 | 72 (0.990) | 5 (0.070) | 5/230 | NT | 7.4% | coding (1255/1785 nt) | PP_3383 | gluconate 2‑dehydrogenase flavoprotein subunit |
| ? | NC_002947 | = 3830208 | 59 (0.870) | coding (1215/1785 nt) | PP_3383 | gluconate 2‑dehydrogenase flavoprotein subunit | |||||
GTCATGCGCAGCAGCGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3830011‑3830168‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccggCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCTGGGGCAGTGCCTGGAAGAAAGCCACGGCCGACTACTACACCCACCAGGTGTCGATGGACGCCCACGGCGCACACCAGTCCTACCGTGGCAATTACCTGGACC < NC_002947/3830208‑3830060 GTCATGCGCAGCAGCGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCC < 1:1617057/150‑1GTCATGCGCAGCAGCGGCTGACCGGAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCATGCACTGCCC < 1:246207/150‑1 ATGCGCAGCAGCGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAG > 1:859514/1‑150 GACCGTAGGCATCGCGGTAGGTGGGGTCCAGGACAGGTTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGCAGCCGGCCGA > 1:1610850/1‑150 ATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGCAGCCGGCCGATTGCCGGTAC > 1:1899283/1‑150 GGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCG < 1:1045277/108‑1 GGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCG > 2:1045277/1‑108 TCCAGGTAATTGCCACGGTAGGACTGGTGTGCGACGATGGCTTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCG < 2:1610850/150‑1 CCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGG < 1:1431580/150‑1 GGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGGCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCT < 2:1899283/150‑1 GCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCTGGGGCAGTGCCTGGAAGAAAGCCACGGCCGACTACTACACCCACCAGGTGTCGATGGACGCCCACGGCGCACACCAGTCCTACCGTGGCAATTACCTGGACC < 2:1363112/150‑1 GTCATGCGCAGCAGCGGCTGACCGTAGGCATCGCGGTAGGTGGGGTCCAGGTCCAGGTAATTGCCACGGTAGGACTGGTGTGCGCCGTGGGCGTCCATCGACACCTGGTGGGTGTAGTAGTCGGCCGTGGCTTTCTTCCAGGCACTGCCCCAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3830011‑3830168‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccggCAGCCGGCCGATTGCCGGTACCTCCAACCCGCCGGGCACTCCGGCCTGGGGCAGTGCCTGGAAGAAAGCCACGGCCGACTACTACACCCACCAGGTGTCGATGGACGCCCACGGCGCACACCAGTCCTACCGTGGCAATTACCTGGACC < NC_002947/3830208‑3830060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |