| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4003395 | 54 (0.740) | 6 (0.090) | 6/234 | NT | 9.4% | intergenic (+9/+74) | PP_3531/PP_3532 | hypothetical protein/AsnC family transcriptional regulator |
| ? | NC_002947 | = 4003419 | 65 (0.940) | intergenic (+33/+50) | PP_3531/PP_3532 | hypothetical protein/AsnC family transcriptional regulator | |||||
GTTGCAGGCCGCCCCTGCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4003272‑4003395‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcCCTGCTGCAGTCGGTCTGCAGC‑CT‑GCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCTGCAAC < NC_002947/4003419‑4003272 GTTGCAGGCCGCCCCTGCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGCCCTGCTGCAGTCGGTCTGCAGC‑CT‑GC > 1:1471505/1‑150 GGCCGCCCCTGCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGCCCTGCTGCAGTCGGTCTGCAGC‑CT‑GCCGGCAC > 1:1095532/1‑150 CCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCG > 1:1175067/1‑94 CCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCG < 2:1175067/94‑1 GCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGCCCTGCTGCAGTCGGTCTGCAGC‑CT‑G > 1:1482323/1‑109 GCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGCCCTGCTGCAGTCGGTCTGCAGC‑CT‑G < 2:1482323/109‑1 CGCCAACCTTGAAGTGCCGG‑CAGGCTGCAGACCGACTGCAGCAGG‑GCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCC > 2:1095532/1‑150 CCTTGAAGTGCCGG‑CAGGCTGCAGACCGACTGCAGC‑AGGGCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGG > 2:1471505/1‑150 TGCCGGCCCTGCTGCAGTCGGTCTGCAGC‑CT‑GCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCT < 1:1785994/150‑1 GCCGGCCCTGCTGCAGTCGGTCTGCAGC‑CT‑GCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCTG < 2:1800736/150‑1 CCGGCCCTGCTGCAGTCGGTCTGCAGC‑CT‑GCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGC < 1:1864836/117‑1 CCGGCCCTGCTGCAGTCGGTCTGCAGC‑CT‑GCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGC > 2:1864836/1‑117 GCCCTGCTGCAGTCGGTCTGCAGC‑CT‑GCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCTGCAAC < 1:849241/150‑1 CCCTGCTGCAGTCGGTCTGCAGC‑CT‑GCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCAC < 1:1765684/116‑1 CCCTGCTGCAGTCGGTCTGCAGC‑CT‑GCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCAC > 2:1765684/1‑116 GTTGCAGGCCGCCCCTGCCGGGGATGTGCCAGGGTGGCTGGCCAACCGGTTTGTGGTGGATACGCCGGTGGTGACGTTGCGTACGTTGCGAGCGGTGGCTGAGCGCCAACCTTGAAGTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4003272‑4003395‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcCCTGCTGCAGTCGGTCTGCAGC‑CT‑GCCGGCACTTCAAGGTTGGCGCTCAGCCACCGCTCGCAACGTACGCAACGTCACCACCGGCGTATCCACCACAAACCGGTTGGCCAGCCACCCTGGCACATCCCCGGCAGGGGCGGCCTGCAAC < NC_002947/4003419‑4003272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |