| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4098626 | 74 (1.010) | 4 (0.060) | 4/238 | NT | 5.1% | coding (108/975 nt) | qor‑II | quinone oxidoreductase |
| ? | NC_002947 | = 4098645 | 78 (1.110) | coding (89/975 nt) | qor‑II | quinone oxidoreductase | |||||
CGCGTAAGCGACCCGGTCGCCCACCTGCACGTTGTGCACCCCATCGCCAATGGCCGAGACCCTGCCAGCGCCTTCCAGTCCCAGGCCTGAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4098473‑4098626‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccAGGTCTGGCTGGAGCAGACGGCCATGGGCGTGAACCCGCTGGATGTGTTGCAGCGCAAGGGGGGAGCAGCGCTGGCATT < NC_002947/4098645‑4098567 CGCGTAAGCGACCCGGTCGCCCACCTGCACGTTGTGCACCCCATCGCCAATGGCCGAGACCCTGCCAGCGCCTTCCAGTCCCAGGCCTGAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCTGGTTCACACCCAT < 2:478470/150‑1 GCGTAAGCGACCCGGTCGCCCACCTGCACGTTGTGCACCCCATCGCCAATGGCCGAGACCCTGCCGGAGCCTTCCAGTCCCAGGCCTGAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATG > 2:1784834/1‑150 GCGTAAGCGACCCGGTCGCCCACCTGCACGTTGTGCACCCCATCGCCAATGGCCGAGACCCTGCCAGCGCCTTCCAGTCCCAGGCCTGAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATG > 1:1244888/1‑150 GTAAGCGACCCGGTCGCCCACCTGCACGTTGTGCACCCCATCGCCAATGGCCGAGACCCTGCCAGCGCCTTCCAGTCCCAGGCCTGAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGGC > 2:655166/1‑150 TAAGCGACCCGGTCGCCCACCTGCACGTTGTGCACCCCATCGCCAATGGCCGAGACCCTGCCAGCGCCTTCCAGTCCCAGGCCTGAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGGCC < 1:104784/150‑1 CCTGCACGTTGTGCACCCCATCGCCAATGGCCGAGACCCTGCCAGCGCCTTCCAGTCCCAGGCCTGAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGGCC‑‑GTCTGGCTGGAGCAGACGG < 1:950321/150‑1 GCACCCCATCGCCAATGGCCGAGACCCTGCCAGCGCCTTCCAGTCCCAGGCCTGAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGGCCAGGTCTGGCTGGAGCAGACGGCCATGGGCGT < 2:1595487/150‑1 CTGCCAGCGCCTTCCAGTCCCAGGCCTGAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGGCCAGGTCTGGCTGGAGCAGACGGCCAT > 1:780666/1‑118 CTGCCAGCGCCTTCCAGTCCCAGGCCTGAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGGCCAGGTCTGGCTGGAGCAGACGGCCAT < 2:780666/118‑1 GAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGG < 1:405265/64‑1 GAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGG > 2:405265/1‑64 CCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGGCC > 1:154169/1‑42 CCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGGCC < 2:154169/42‑1 GGCCAGGTCTGGCTGGAGCAGACGGCCATGGGCGTGAACCCGCTGGATGTGTTGCAGCGCAAGGGGGGAGCAGCGCTGGCATT > 1:1435471/1‑83 GGCCAGGTCTGGCTGGAGCAGACGGCCATGGGCGTGAACCCGCTGGATGTGTTGCAGCGCAAGGGGGGAGCAGCGCTGGCATT < 2:1435471/83‑1 CGCGTAAGCGACCCGGTCGCCCACCTGCACGTTGTGCACCCCATCGCCAATGGCCGAGACCCTGCCAGCGCCTTCCAGTCCCAGGCCTGAAGGCAATGCCAGCGCTGCTCCCCCCTTGCGCTGCAACACATCCAGCGGGTTCACGCCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4098473‑4098626‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccAGGTCTGGCTGGAGCAGACGGCCATGGGCGTGAACCCGCTGGATGTGTTGCAGCGCAAGGGGGGAGCAGCGCTGGCATT < NC_002947/4098645‑4098567 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |