| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4330908 | 97 (1.330) | 7 (0.100) | 6/234 | NT | 6.6% | coding (310/747 nt) | PP_3802 | cation ABC transporter ATP‑binding protein |
| ? | NC_002947 | = 4330959 | 107 (1.550) | coding (361/747 nt) | PP_3802 | cation ABC transporter ATP‑binding protein | |||||
GCAAGAGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4330753‑4330908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggccgGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGCAAG < NC_002947/4330959‑4330811 GCAAGAGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCA > 1:1599622/1‑150 CAAGAGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCAT < 1:626321/150‑1 AAGAGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATG > 2:1729414/1‑150 AGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGCCCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCC < 1:803750/150‑1 GCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCG < 1:1657747/150‑1 CAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCA > 2:516309/1‑106 CAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCA < 1:516309/106‑1 TTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCAT < 2:1599622/150‑1 GAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCC > 1:1119493/1‑132 GAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCC < 2:1119493/132‑1 TTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAA < 1:860558/105‑1 TTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAA > 2:860558/1‑105 GACAGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAA < 1:1862145/102‑1 GACAGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAA > 2:1862145/1‑102 ATGGCCGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAA < 1:386177/150‑1 TGGCCGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAAT > 1:862897/1‑150 GGCCGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATG < 1:1095140/150‑1 GCCGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGC > 1:888118/1‑150 CGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGTCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGCAA < 1:561270/150‑1 CGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGCAA < 2:1133321/150‑1 CGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGCAA > 1:1662394/1‑150 CGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACCCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGCAA < 1:456976/150‑1 CGGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATAGCCCCCTTGTATTGGCAGGCCGCGGGCTAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGCAA < 1:1690019/150‑1 GGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGCAAG > 1:1729414/1‑150 GCAAGAGCTCGTTGATCAAGACCCTGCTCGGGCAGATGCCACACCAGGGCCAGCTGACCTTGCATTGGCCTGGTGAGCGCGAAGTGATTGGCTACGTGCCGCAGGCACTGGAGTTCGACCGCGGCCTGCCCATGACCGTGGACGATTTCATGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4330753‑4330908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggccgGCTTCACGCGCCGCGACAGGCCGAGGAAGGCCGGGCGGCGCTGGCACATGGCGGCCATGAAATCGTCCACGGTCATGGGCAGGCCGCGGTCGAACTCCAGTGCCTGCGGCACGTAGCCAATCACTTCGCGCTCACCAGGCCAATGCAAG < NC_002947/4330959‑4330811 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |