| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4401734 = | 87 (1.190) | 6 (0.090) | 6/238 | NT | 7.0% | coding (1464/1809 nt) | PP_3881 | terminase large subunit |
| ? | NC_002947 | 4401761 = | 77 (1.100) | coding (1437/1809 nt) | PP_3881 | terminase large subunit | |||||
CATCAGCAAGCTGCATGTGTTGCGTCGGCTGCAGACTATCTGTGACTTCTTCCAGGTGGACAAGATCGCCTTTGACCGTTGGCGCATTGAAGACATGCGGCAGTTGATGAGCGAGTACGACATCACACTGCCTGAGCTCGTTGAGTTCGGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4401887‑4401734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagTGTGATGTCGTACTCGCTCATCAACTGCCGCATGTCTTCAATGCGCCAACGGTCAAAGGCGATCTTGTCCACCTGGAAGAAGTCACAGATAGTCTGCAGCCGACGCAACACATGCAGCTTGCTGATGGCGCGCCCTGGCGTCGTTTCCA > NC_002947/4401761‑4401909 cgTCATCAAGCTGCATGTGTTGCGTCGGCTGCAGACTATCTGTGACTTCTTCCAGGTGGACAAGATCGCCTTTGACCGTTGGCGCATTGAAGACATGCGGCAGTTGATGAGCGAGTACGACATCACACTGCCTGAGCTCGTTGAGTTCGG < 1:1160496/148‑1CATCAGCAAGCTGCATGTGTTGCGTCGGCTGCAGACTATCTGTGACTTCTTCCAGGTGGACAAGATCGCCTTTGACCGTTGGCGCATTGAAGACATGCGGCAGTTGATGAGCGAGTACGACATCACACTGCCTGAGCTCGTTGAGTTCGG < 1:627715/150‑1 ATGTGTTGCGTCGGCTGCAGACTATCTGTGACTTCTTCCAGGTGGACAAGATCGCCTTTGACCGTTGGCGCATTGAAGACATGCGGCAGTTGATGAGCGAGTACGACATCACACTGCCTGAGCTCGTTGAGTTCGGGCAG > 1:472797/1‑140 ATGTGTTGCGTCGGCTGCAGACTATCTGTGACTTCTTCCAGGTGGACAAGATCGCCTTTGACCGTTGGCGCATTGAAGACATGCGGCAGTTGATGAGCGAGTACGACATCACACTGCCTGAGCTCGTTGAGTTCGGGCAG < 2:472797/140‑1 TGACTTCTTCCAGGTGGACAAGATCGCCTTTGACCGTTGGCGCATTGAAGACATGCGGCAGTTGATGAGCGAGTACGACATCACACTGCCCGAACTCAACGAGCTCAGGCAGTGTGATGTCGTACTCGCTCATCAACTGCCGC > 1:1112724/1‑143 TGACTTCTTCCAGGTGGACAAGATCGCCTTTGACCGTTGGCGCATTGAAGACATGCGGCAGTTGATGAGCGAGTACGACATCACACTGCCCGAACTCAACGAGCTCAGGCAGTGTGATGTCGTACTCGCTCATCAACTGCCGC < 2:1112724/143‑1 GGTGGACAAGATCGCCTTTGACCGTTGGCGCATTGAAGACATGCGGCAGTTGATGAGCGAGTACGACATCACACTGCCCGAACTCAACGAGCTCAGGCAGTGTGAT > 1:1469813/1‑106 GGTGGACAAGATCGCCTTTGACCGTTGGCGCATTGAAGACATGCGGCAGTTGATGAGCGAGTACGACATCACACTGCCCGAACTCAACGAGCTCAGGCAGTGTGAT < 2:1469813/106‑1 ACTGCCTGAGCTCGTTGAGTTCGGGCAGTGTGATGTCGTACTCGCTCATCAACTGCCGCATGTCTTCAATGCGCCAACGGTCAAAGGCGATCTTGTCCACCTGGAAGAAGTCACAGATAGTCTGCAGCCGACGCAACACATGCAGCTTGC > 1:892011/1‑150 TTGAGTTCGGGCAGTGTGATGTCGTACTCGCTCATCAACTGCCGCATGTCTTCAATGCGCCAACGGTCAAAGGCGATCTTGTCCACCTGGAAGAAGTCACAGATAGTCTGCAGCCGACGCAACACATGCAGCTTGCTGATGGCGCGCCCT < 2:892011/150‑1 GCAGTGTGATGTCGTACTCGCTCATCAACTGCCGCATGTCTTCAATGCGCCAACGGTCAAAGGCGATCTTGTCCACCTGGAAGAAGTCACAGATAGTCTGCAGCCGACGCAACACATGCAGCTTGCTGATGGCGCGCCCTGGCGTCGTTT > 2:1447353/1‑150 CAGTGTGATGTCGTACTCGCTCATCAACTGCCGCATGTCTTCAATGCGCCAACGGTCAAAGGCGATCTTGTCCACCTGGAAGAAGTCACAGATAGTCTGCAGCCGACGCAACACATGCAGCTTGCTGATGGCGCGCCCTGGCGTCGTTTC < 1:1447353/150‑1 GTGTGATGTCGTACTCGCTCATCAACTGCCGCATGTCTTCAATGCGCCAACGGTCAAAGGCGATCTTGTCCACCTGGAAGAAGTCACAGATAGTCTGCAGCCGACGCAACACATGCAGCTTGCTGATGGCGCGCCCTGGCGTCGTTTCCA < 2:312819/150‑1 CATCAGCAAGCTGCATGTGTTGCGTCGGCTGCAGACTATCTGTGACTTCTTCCAGGTGGACAAGATCGCCTTTGACCGTTGGCGCATTGAAGACATGCGGCAGTTGATGAGCGAGTACGACATCACACTGCCTGAGCTCGTTGAGTTCGGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4401887‑4401734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagTGTGATGTCGTACTCGCTCATCAACTGCCGCATGTCTTCAATGCGCCAACGGTCAAAGGCGATCTTGTCCACCTGGAAGAAGTCACAGATAGTCTGCAGCCGACGCAACACATGCAGCTTGCTGATGGCGCGCCCTGGCGTCGTTTCCA > NC_002947/4401761‑4401909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |