| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4551237 | 72 (0.990) | 7 (0.100) | 7/234 | NT | 8.9% | coding (562/1275 nt) | pydA | NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA |
| ? | NC_002947 | = 4551255 | 76 (1.100) | coding (580/1275 nt) | pydA | NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA | |||||
TTGCCCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4551083‑4551237‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccc‑CGCCTCG‑ATGCGCGGCGCGGGCCGACTGGCGGATATCGGTGATGTTCGGCGTAAGCTTCACGATCACCGGCAGCGCGCAGTACGTCTTGCACCAGCGGGTGACCATTTCCACATATTCCGGCACCTGGCCGACGGCCGCCCCCATGCC < NC_002947/4551255‑4551108 TTGCCCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTC < 1:960415/150‑1TTGCCCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTC < 2:830034/150‑1 CCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCC > 2:1113165/1‑150 CCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCC > 2:1316865/1‑150 CGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGAGCTACATACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC > 1:336269/1‑150 ATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑CGCCTCG‑ATGCGCGGCGCGGGCC < 2:204578/150‑1 GGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑CGCCTCG‑ATGCGCGGCGCGGGCCGACTGG < 1:481095/130‑1 GGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑CGCCTCG‑ATGCGCGGCGCGGGCCGACTGG > 2:481095/1‑130 AATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑CGCCTCG‑ATGCGCGGCGCGG < 1:680821/119‑1 AATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑CGCCTCG‑ATGCGCGGCGCGG > 2:680821/1‑119 ACCGATATCCGCCAGTCGGCCCGCGCCGCGCAT‑CGAGGCG‑GGGCCGACTGGCGGATATCGGTGATGTTCGGCGTAAGCTTCACGATCACCGGCAGCGCGCAGTACGTCTTGCACCAGCGGGTGA > 2:166713/1‑124 ACCGATATCCGCCAGTCGGCCCGCGCCGCG‑CATCGAGGCG‑GGGCCGACTGGCGGATATCGGTGATGTTCGGCGTAAGCTTCACGATCACCGGCAGCGCGCAGTACGTCTTGCACCAGCGGGTGA < 1:166713/124‑1 CC‑CGCCTCG‑ATGCGCGGCGCGGGCCGACTGGCGGATATCGGTGATGTTCGGCGTAAGCTTCACGATCACCGGCAGCGCGCAGTACGTCTTGCACCAGCGGGTGACCATTTCCACATATTCCGGCACCTGGCCGACGGCCGCCCCCATGCC > 1:1502608/1‑150 TTGCCCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4551083‑4551237‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccc‑CGCCTCG‑ATGCGCGGCGCGGGCCGACTGGCGGATATCGGTGATGTTCGGCGTAAGCTTCACGATCACCGGCAGCGCGCAGTACGTCTTGCACCAGCGGGTGACCATTTCCACATATTCCGGCACCTGGCCGACGGCCGCCCCCATGCC < NC_002947/4551255‑4551108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |