| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4591455 = | 92 (1.260) | 5 (0.070) | 5/240 | NT | 5.6% | coding (480/816 nt) | liuC | methylglutaconyl‑CoA hydratase |
| ? | NC_002947 | 4591508 = | 81 (1.150) | coding (533/816 nt) | liuC | methylglutaconyl‑CoA hydratase | |||||
GCCCAGCTCGCGTGCGCGCACGCCAGTGAAACGCTCGGCGGTGAGGGCGTAGCGGCG‑‑‑‑CGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4591515‑4591455‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgAGCTGGGCCTGCTGGCCGAGGTGTACCCGGCCAGCGAACTGGACGACCACGTCGAAGCCTGGGTAAGCAACCTGCTGCAGAACAGCCCGCAAGCATTGCGCGCCACCAAGGACTTGCTGCGCGAAGTGGACGACGGCGAACTCAGCC > NC_002947/4591508‑4591654 GCCCAGCTCGCGTGCGCGCACGCCAGTGAAACGCTCGGCGGTGAGGGCGTAGCGGCG‑‑‑‑CGCGAGCTTGGCCTGCTGGCCGAGGTGTACCCGGCCAGCGAACTGGACGACCACGTCGAAGCCTGGGTAAGCAACCTGCTGCAGAACAGCCC < 1:1641252/149‑1GCCCAGCTCGCGTGCGCGCACGCCAGTGAAACGCTCGGCGGTGAGGGCGTAGCGGCG‑‑‑‑CGCGAGCTTGGCCTGCTGGCCGAGGTGTACCCGGCCAGCGAACTGGACGACCACGTCGAAGCCTGGGTAAGCAACCTGCTGCAGAACAGCCC > 2:1641252/1‑149 TGCGCGCACGCCAGTGAAACGCTCGGCGGTGAGGGCGTAGCGGCGCGCACGCGAGCTGGGCCTGCTGGCCGAGGTGTACCCGGCCAGCGAACTGGACGACCACGTCGAAGCCTGGGTAAGCAACCTGCTGCA < 1:1470140/132‑1 TGCGCGCACGCCAGTGAAACGCTCGGCGGTGAGGGCGTAGCGGCGCGCACGCGAGCTGGGCCTGCTGGCCGAGGTGTACCCGGCCAGCGAACTGGACGACCACGTCGAAGCCTGGGTAAGCAACCTGCTGCA > 2:1470140/1‑132 CAGTGAAACGCTCGGCGGTGAGGGCGTAGCGGCG‑‑‑‑CGCGAGCTGGGCCTGCTGGCCGAGGTGTACCCGGCCAGCGAACTGGACGACCACGTCGAAGCCTGGGTAAGCAACCTGCTGCAGAACAGCCCGCAAGCATTGCGCGCCACCAAGGA > 2:343711/1‑150 GCGAGCTGGGCCTGCTGGCCGAGGTGTACCCGGCCAGCGATCTGGACGACCACGTCGAAGCCTGGGTAAGCAACCTGCTGCAGAACAGCCCGCAAGCATTGCGCGCCACCAAGGACTTGCTGCGCGAAGTGGACGACGGCGAACTCAGCC > 1:1854686/1‑150 GCCCAGCTCGCGTGCGCGCACGCCAGTGAAACGCTCGGCGGTGAGGGCGTAGCGGCG‑‑‑‑CGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4591515‑4591455‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgAGCTGGGCCTGCTGGCCGAGGTGTACCCGGCCAGCGAACTGGACGACCACGTCGAAGCCTGGGTAAGCAACCTGCTGCAGAACAGCCCGCAAGCATTGCGCGCCACCAAGGACTTGCTGCGCGAAGTGGACGACGGCGAACTCAGCC > NC_002947/4591508‑4591654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |