New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4832376 =	63 (0.860)	5 (0.070)	5/236	NT	8.3%	coding (860/1014 nt)	pvdY	hydroxyproline acetylase
	?	NC_002947	4832395 =	51 (0.730)					coding (841/1014 nt)	pvdY	hydroxyproline acetylase

GATGACTACGACCGTGGTATCCATATGCTGGTGGGAGAGGAGAGCCACCGAGGGCCGCACAAGGTGGCCAGCTGGCTATCGGCGTTGGTGCACTACCTTTTCCTGGATGACCCGC‑GCACCCAGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4832503‑4832376 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtCATCCAGGAAAAGGTAGTGCACCAACGCCGATAGCCAGCTGGCCACCTTGTGCGGCCCTCGGTGGCTCTCCTCTCCCACCAGCATATGGATACCACGGTCGTAGTCATCGGCCGGGTAGAAGGGGGCAATGCGGTCCTCCTTGGCCCA  >  NC_002947/4832395‑4832542                                                                                                                                                                                                                                                                                       GATGACTACGACCGTGATATCCAGATGCTGGTGGGGGAGGAGAGCCACCGAGGGCCGCACAAGGTGGCCAGCTGGCTATCGGCGTTGGTGCACTACCTTTGCCTGGATGACCCGC‑TGGGTGCGCGGGTCATCCAGGAAAAGGTAGTGCAC                                                                                                                                <  2:1421334/150‑1                                                         GCACAAGGTGGCCAGCTGGCTATCGGCGTTGGTGCACTACCTTTTCCTGGATGACCCGCTGGGTGC‑GCGGGTCATCCAGGAAAAGGTAGTG                                                                                                                                   <  1:1012420/91‑1                                                         GCACAAGGTGGCCAGCTGGCTATCGGCGTTGGTGCACTACCTTTTCCTGGATGACCCGCTGGGTGC‑GCGGGTCATCCAGGAAAAGGTAGTG                                                                                                                                   >  2:1012420/1‑91                                                                                                   TTTCCTGGATGACCCGC‑GCACCCAGCGGGTCATCCAGGAAAAGGTAGTGCACCAACGCCGATAGCC                                                                                                                  <  1:678851/66‑1                                                                                                   TTTCCTGGATGACCCGC‑GCACCCAGCGGGTCATCCAGGAAAAGGTAGTGCACCAACGCCGATAGCC                                                                                                                  >  2:678851/1‑66                                                                                                                                aTCATCCATGAAAAGGTAGTGCACCAACGCCGATAGCCAGCTGGCCACCTTGTGCGGCCCTCGGTGGCTCTCCTCTCCCACCAGCATATGGATACCACGGTCGTAGTCATCGGCCGGGTAGAAGGGGGCAATGCGGTCCTCCTTGGCCCA  >  2:966329/2‑150                                                                                                                                                                                                                                                                                       GATGACTACGACCGTGGTATCCATATGCTGGTGGGAGAGGAGAGCCACCGAGGGCCGCACAAGGTGGCCAGCTGGCTATCGGCGTTGGTGCACTACCTTTTCCTGGATGACCCGC‑GCACCCAGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4832503‑4832376 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtCATCCAGGAAAAGGTAGTGCACCAACGCCGATAGCCAGCTGGCCACCTTGTGCGGCCCTCGGTGGCTCTCCTCTCCCACCAGCATATGGATACCACGGTCGTAGTCATCGGCCGGGTAGAAGGGGGCAATGCGGTCCTCCTTGGCCCA  >  NC_002947/4832395‑4832542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.