New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5207233 =	77 (1.050)	4 (0.060)	4/238	NT	5.1%	coding (117/594 nt)	PP_4588	nitroreductase family oxidoreductase
	?	NC_002947	5207258 =	75 (1.070)					coding (142/594 nt)	PP_4588	nitroreductase family oxidoreductase

CAGCACCAGCGCCGACGCCTGTTGCGCCCAGTTGCGATTGAAGGGCACCAGCAGGCTCAGGTAACGCTCCCAGTTCGGCGTGTCGCGGCGGGCATAAAGGAAGCGCCAAGGCTGCGAGTTATAGGCCGAAGGTGCCCAGCGGGCGGCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5207383‑5207233 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTGGGAGCGTTACCTGAGCCTGCTGGTGCCCTTCAATCGCAACTGGGCGCAACAGGCGTCGGCGCTGGTGCTGGTCATTTCCAAGACCACGT  >  NC_002947/5207258‑5207402                                                                                                                                                                                                                                                                                                          CAGCACCAGCGCCGACGCCTGTTGCGCCCAGTTGCGATTGAAGGGCACCAGCAGGCTCAGGTAACGCTCCCAGTTCGGCGTGTCGCGGCGGGCATAAAGGAAGCGCCAAGGCTGCGAGTTATAGGCCGAAGGTGCCCAGCGGGCGGCTTC                                                                                                                                                    >  1:1147207/1‑150                                                                                                               GCTGCGAGTTATAGGCCGAAGGTGCCCAGCGGGCGGCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTT                                                                                                                    <  1:698684/72‑1                                                                                                               GCTGCGAGTTATAGGCCGAAGGTGCCCAGCGGGCGGCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTT                                                                                                                    >  2:698684/1‑72                                                                                                                               CGAAGGTGCCCAGCGGGCGGCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCG                                                                                                          <  1:1009690/66‑1                                                                                                                               CGAAGGTGCCCAGCGGGCGGCTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCG                                                                                                          >  2:1009690/1‑66                                                                                                                                                   CTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTGGGAGCGTTACCTGAGCCTGCTGGTGCCCTTCAATCGCAACTGGGCGCAGCAGGCGTCGGCGCGGGTGCTGGTCATTTCCAAGACCACGT  >  1:973139/1‑150                                                                                                                                                   CTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTGGGAGCGTTACCTGAGCCTGCTGGTGCCCTTCAATCGCAACTGGGCGCAACA                                        >  1:446797/1‑112                                                                                                                                                   CTTCGGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTGGGAGCGTTACCTGAGCCTGCTGGTGCCCTTCAATCGCAACTGGGCGCAACA                                        <  2:446797/112‑1                                                                                                                                                                                                                                                                                                          CAGCACCAGCGCCGACGCCTGTTGCGCCCAGTTGCGATTGAAGGGCACCAGCAGGCTCAGGTAACGCTCCCAGTTCGGCGTGTCGCGGCGGGCATAAAGGAAGCGCCAAGGCTGCGAGTTATAGGCCGAAGGTGCCCAGCGGGCGGCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5207383‑5207233 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgGCCTATAACTCGCAGCCTTGGCGCTTCCTTTATGCCCGCCGCGACACGCCGAACTGGGAGCGTTACCTGAGCCTGCTGGTGCCCTTCAATCGCAACTGGGCGCAACAGGCGTCGGCGCTGGTGCTGGTCATTTCCAAGACCACGT  >  NC_002947/5207258‑5207402

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.