New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5584576	49 (0.670)	3 (0.040)	3/234	NT	5.3%	coding (1207/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	= 5584609	61 (0.890)					coding (1174/2259 nt)	parC	DNA topoisomerase IV subunit A

TGGCTTGCTCCTTCAGCAACTCATCCTGCTCACCGCGGATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5584426‑5584576 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcctcAACCTGGATGAAGTGATCCACATCATCCGTACCGAGGAATATCCCAAGCAGGCCCTGATCGAACGTTTCGAGCTGACCGAGATACAGGCCGACTACATCCTCGAGACCCGCCTGCGGCAGTTGGCGCGCCTGGAAGAGATGAAG  <  NC_002947/5584609‑5584466                                                                                                                                                                                                                                                                                                         TGGCTTGCTCCTTCAGCAACTCATCCTGCTCACCGCGGATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCT                                                                                                                                                   <  1:669139/150‑1   GCTTGCTCCTTCAGCAACTCATCCTGCTCACCGCGGATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCc                                                                                                                                                 <  2:1334672/150‑2                                   GCGGATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCAACCTGGATGAAGTGATCCACATCATCCGTACC                                                                                                                 <  2:1890501/150‑1                                                                                                  CTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCAACCTGGATGAAGTGATCCACATCATCCGTACCGAGGAATATC                                                                                                       <  1:1475079/97‑1                                                                                                  CTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCAACCTGGATGAAGTGATCCACATCATCCGTACCGAGGAATATC                                                                                                       >  2:1475079/1‑97                                                                                                                                                  TTCCTCAACCTGGATGAAGTGATCCACATCATCCGTACCGAGGAATATCCCAAGCAGGCCCTGATCGAACGTTTCGAGCTGACCGAGATACAGGCCGACTACATCCTCGAGACCCGCCTGCGGCAGTTGGCGCGCCTGGAAGAGATGAAG  <  1:1652115/150‑1                                                                                                                                                                                                                                                                                                         TGGCTTGCTCCTTCAGCAACTCATCCTGCTCACCGCGGATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5584426‑5584576 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcctcAACCTGGATGAAGTGATCCACATCATCCGTACCGAGGAATATCCCAAGCAGGCCCTGATCGAACGTTTCGAGCTGACCGAGATACAGGCCGACTACATCCTCGAGACCCGCCTGCGGCAGTTGGCGCGCCTGGAAGAGATGAAG  <  NC_002947/5584609‑5584466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.