| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5652763 = | 103 (1.410) | 6 (0.080) | 6/242 | NT | 5.4% | coding (188/330 nt) | PP_4961 | lipoprotein |
| ? | NC_002947 | 5652800 = | 111 (1.560) | coding (151/330 nt) | PP_4961 | lipoprotein | |||||
CTGGCAGGATGCTCACTGCTGCAGCCGGCGCAACCGGCCCCGGCAGACAACTGGACCCGTTGGGTCTGCGACACCCAGGCTGAGGTGCTTTGGCGCTTCGCCGATGCGCAACGTGACCAGGTTGACGTGCGCCTTGGCGGCGGCGACCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5652914‑5652763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTT > NC_002947/5652800‑5652947 CTGGCAGGATGCTCACTGCTGCAGCCGGCGCAACCGGCCCCGGCAGACAACTGGACCCGTTGGGTCTGCGACACCCAGGCTGAGGTGCTTTGGCGCTTCGCCGATGCGCAACGTGACCAGGTTGACGTGCGCCTTGGCGGCGGCGACCAG < 1:1414676/150‑1CTGGCAGGATGCTCACTGCTGCAGCCGGCGCAACCGGCCCCGGCAGACAACTGGACCCGTTGGGTCTGCGACACCCAGGCTGAGGTGCTTTGGCGCTTCGCCGATGCGCAACGTGACCAGGTTGACGTGCGCCTTGGCGGCGGCGACCAG < 2:161880/150‑1 GGCAGGATGCTCACTGCTGCAGCCGGCGCAACCGGCCCCGGCAGACAACTGGACCCGTTGGGTCTGCGACACCCAGGCTGAGGTGCTTTGGCGCTTCGCCGATGCGCAACGTGACCAGGTTGACGTGCGCCTTGGCGGCGGCGACCAGGT > 2:1881779/1‑150 TCTGCGACACCCAGGCTGAGGTGCTTTGGCGCTTCGCCGATGCGCAACGTGACCAGGTTGACGTGCGCCTTGGCGGCGGCGACCAGGT > 1:1214379/1‑88 TCTGCGACACCCAGGCTGAGGTGCTTTGGCGCTTCGCCGATGCGCAACGTGACCAGGTTGACGTGCGCCTTGGCGGCGGCGACCAGGT < 2:1214379/88‑1 GCAACGTGACCAGGTTGACGTGCGCCTTGGCGGCGGCGACCAGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTT < 1:1077413/129‑1 GCAACGTGACCAGGTTGACGTGCGCCTTGGCGGCGGCGACCAGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTT > 2:1077413/1‑129 ACGTGACCAGGTTGACGTGCGCCTTGGCGGCGGCGACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGT < 1:1543701/143‑1 ACGTGACCAGGTTGACGTGCGCCTTGGCGGCGGCGACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGT > 2:1543701/1‑143 CCAGGTTGACGTGCGCCTTGGCGGCGGCGACCAGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGC < 1:608554/115‑1 CCAGGTTGACGTGCGCCTTGGCGGCGGCGACCAGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGC > 2:608554/1‑115 GGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTT < 2:1292271/150‑1 GTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTT < 2:1614060/150‑1 TCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGC < 1:632169/96‑1 TCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGC > 2:632169/1‑96 CTGGCAGGATGCTCACTGCTGCAGCCGGCGCAACCGGCCCCGGCAGACAACTGGACCCGTTGGGTCTGCGACACCCAGGCTGAGGTGCTTTGGCGCTTCGCCGATGCGCAACGTGACCAGGTTGACGTGCGCCTTGGCGGCGGCGACCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5652914‑5652763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTT > NC_002947/5652800‑5652947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |