New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5661091	75 (1.030)	4 (0.060)	4/228	NT	5.5%	coding (665/1701 nt)	ligB	DNA ligase B
	?	NC_002947	= 5661120	69 (1.030)					coding (694/1701 nt)	ligB	DNA ligase B

CCCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5660934‑5661091 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctgttGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGC  <  NC_002947/5661120‑5660977                                                                                                                                                                                                                                                                                                                CCCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATC                                                                                                                                                          <  1:64579/150‑1  CCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCG                                                                                                                                                         >  1:650582/1‑150  CCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCG                                                                                                                                                         >  1:1724960/1‑150    gaaGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGC                                                                                                                                                       >  1:1933813/4‑150     AGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCC                                                                                                                                                      <  1:1679743/150‑1       GCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTG                                                                                                                                                    <  2:906855/150‑1                                                GGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTT                                                                                                                                                  <  1:647375/111‑1                                                GGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTT                                                                                                                                                  >  2:647375/1‑111                                                                                     GCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGC                                                                                                              <  1:37663/110‑1                                                                                     GCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGC                                                                                                              >  2:37663/1‑110                                                                                      CCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGC                                                                                                                                                       <  2:1301716/68‑1                                                                                      CCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGC                                                                                                                                                       >  1:1301716/1‑68                                                                                                              TCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACA                                                                                                                 <  1:28499/82‑1                                                                                                              TCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACA                                                                                                                 >  2:28499/1‑82                                                                                                                                                   gtttGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCAGACGAATAGGCCGATAGCGTTGGCTTATGCGCCGGTCAGTTGCTTCCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTACCTGCCTTGGCTTGCACATTTTCGT        >  2:164596/5‑150                                                                                                                                                       GGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAG    <  1:132693/150‑1                                                                                                                                                        GCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCTTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGG   <  2:52323/150‑1                                                                                                                                                        GCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGCTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGG   <  1:94062/150‑1                                                                                                                                                         CCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTTCCTTGGCTTGCACATGTTCGTCCAGGC  >  2:344079/1‑150                                                                                                                                                                                                                                                                                                                CCCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5660934‑5661091 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctgttGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAGGC  <  NC_002947/5661120‑5660977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.