New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5661091	75 (1.030)	4 (0.060)	4/228	NT	5.5%	coding (665/1701 nt)	ligB	DNA ligase B
	?	NC_002947	= 5661120	69 (1.030)					coding (694/1701 nt)	ligB	DNA ligase B

GTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTGGCGCGAGCACTGGTATCG  >  NC_002947/5660943‑5661235                                                                                                                                                      |                                                                                                                                                 gTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTc                                                                                                                                                 >  2:651191/1‑150 (MQ=255) gTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTc                                                                                                                                                 >  1:343293/1‑150 (MQ=255)       cTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTgg                                                                                                                                           >  1:855234/1‑150 (MQ=255)         gCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGAAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTgggg                                                                                                                                         >  1:344079/1‑150 (MQ=255)            cTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACGGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTg                                                                                                                                      >  1:117555/1‑150 (MQ=255)             ttGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTTGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTgg                                                                                                                                     >  1:1687803/1‑150 (MQ=255)               gCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGcc                                                                                                                                   >  1:1519340/1‑150 (MQ=255)                   ggTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTTGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCAc                                                                                                                               <  2:1687803/150‑1 (MQ=255)                   ggTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCAc                                                                                                                               >  2:1157351/1‑150 (MQ=255)                   ggTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCAc                                                                                                                               <  2:1519340/150‑1 (MQ=255)                    gTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACg                                                                                                                              <  2:650582/150‑1 (MQ=255)                       ggCTGTATCCGCGCCTGGACGAACATGTGCAAGCCAAGGCGGGCAATACCCAAATTTTTTATTCCGCAACAGTGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGcc                                                                                                                           <  1:716899/149‑1 (MQ=255)                             aTCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGc                                                                                                                     <  2:1060820/150‑1 (MQ=255)                                   gcCTGGACGAACATGTGCAAGCCAAGGAAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaacagg                                                                                                               >  2:344079‑M2/1‑144 (MQ=255)                                    ccTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTAGCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaacaggc                                                                                                              <  1:94062‑M2/150‑8 (MQ=255)                                    ccTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑AAGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaacaggc                                                                                                              <  2:52323‑M2/150‑8 (MQ=255)                                     cTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaacaggcc                                                                                                             <  1:132693‑M2/150‑9 (MQ=255)                                       ggACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTT                                                                                                                                                  <  1:647375‑M1/111‑1 (MQ=255)                                       ggACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTT                                                                                                                                                  >  2:647375‑M1/1‑111 (MQ=255)                                         aCGAAAATGTGCAAGCCAAGGCAGGTAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGGAAGCAACTGACCGGCGCATAAGCCA‑ACGCTATCGGCCTATTCGTCTGGGGCTGGCCGCACGGCCCCGAGCaacaggccaaac                                                                                                         >  2:164596‑M2/1‑138 (MQ=255)                                          cGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGACCGCACGGCCCCGAGCAACAGGCCGAACg                                                                                                        >  2:1700048/1‑150 (MQ=255)                                           gAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGc                                                                                                       >  1:111081/1‑150 (MQ=255)                                           gAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACAGACAGGCGCACAAGGCA‑ACGCTCTCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGc                                                                                                       <  2:558561/150‑1 (MQ=255)                                             aCATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGTTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCt                                                                                                     >  1:1568523/1‑150 (MQ=255)                                             aCATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCt                                                                                                     >  1:1318687/1‑150 (MQ=255)                                              cATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTc                                                                                                    <  2:817328/150‑1 (MQ=255)                                                 gtgCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGcc                                                                                                 <  1:1548313/150‑1 (MQ=255)                                                   gCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCa                                                                                               <  1:1745552/150‑1 (MQ=255)                                                      aGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGcc                                                                                                                                   >  1:125582/1‑111 (MQ=255)                                                      aGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGcc                                                                                                                                   <  2:125582/111‑1 (MQ=255)                                                      aGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGc                                                                                                       <  2:356917/139‑1 (MQ=255)                                                      aGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGc                                                                                                       >  1:356917/1‑139 (MQ=255)                                                      aGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCt                                                                                            <  2:111081/150‑1 (MQ=255)                                                       gCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGC‑CAAGGCATACTCTATCGGCCTGTTCGTGTGGGGGCGCCCCCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCCGCTg                                                                                           >  1:434192/1‑150 (MQ=255)                                                         cAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGc                                                                                         >  1:1768041/1‑150 (MQ=255)                                                               aggcagCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACt                                                                                   >  2:1794341/1‑150 (MQ=255)                                                                ggcagCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTTGTTCCGTCCTCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTg                                                                                  <  2:1141214/150‑1 (MQ=255)                                                                 gcagCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTgg                                                                                 <  2:1570250/150‑1 (MQ=255)                                                                  cagCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTggg                                                                                <  1:127771/150‑1 (MQ=255)                                                                      gcCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGtttt                                                                            >  1:935263/1‑150 (MQ=255)                                                                       ccAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGccc                                                                                                                          >  1:518527/1‑103 (MQ=255)                                                                       ccAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGccc                                                                                                                          <  2:518527/103‑1 (MQ=255)                                                                       ccAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCt                                                                                            <  1:536039/133‑1 (MQ=255)                                                                       ccAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCt                                                                                            >  2:536039/1‑133 (MQ=255)                                                                       ccAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTc                                                                           >  2:946116/1‑150 (MQ=255)                                                                       ccAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTc                                                                           <  1:1794341/150‑1 (MQ=255)                                                                       ccAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTAGCAGCGTGCTAGTGCGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTc                                                                           >  1:136382/1‑150 (MQ=255)                                                                            gCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTgctcggggccgtgcggccagccccacacgaacaggc                                                                                                              >  2:37663‑M1/1‑74 (MQ=255)                                                                            gCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTgctcggggccgtgcggccagccccacacgaacaggc                                                                                                              <  1:37663‑M1/110‑37 (MQ=255)                                                                            gCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGAc                                                                      >  1:31841/1‑150 (MQ=255)                                                                             cccGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGCGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGAca                                                                     <  2:117555/150‑1 (MQ=255)                                                                              ggggggTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGAcag                                                                    >  1:67463/3‑150 (MQ=255)                                                                              ccGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGAcag                                                                    >  1:1242063/1‑150 (MQ=255)                                                                                ggggTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGAcagcc                                                                  <  1:1707436/150‑1 (MQ=255)                                                                                  ggTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGAcagccag                                                                <  2:1768041/150‑1 (MQ=255)                                                                                  ggTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGAcagccag                                                                >  1:24854/1‑150 (MQ=255)                                                                                      ccGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGc                                                                                             <  1:635720/117‑1 (MQ=255)                                                                                      ccGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGc                                                                                             >  2:635720/1‑117 (MQ=255)                                                                                       cGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTa                                                           <  1:255115/150‑1 (MQ=255)                                                                                        gTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTAc                                                          >  1:21986/1‑150 (MQ=255)                                                                                            cAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTgg                                                                                 <  2:250982/123‑1 (MQ=255)                                                                                            cAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTgg                                                                                 >  1:250982/1‑123 (MQ=255)                                                                                             aGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCAt                                                     <  2:343293/150‑1 (MQ=255)                                                                                                  tgctCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCa                                                <  1:675741/150‑1 (MQ=255)                                                                                                     tCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTgctcggggccgtgcggccagccccacacgaaca                                                                                                                 <  1:28499‑M1/82‑34 (MQ=255)                                                                                                     tCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTgctcggggccgtgcggccagccccacacgaaca                                                                                                                 >  2:28499‑M1/1‑49 (MQ=255)                                                                                                       gcacgcaAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGAc                                                                                    >  1:196972/1‑109 (MQ=255)                                                                                                       gcacgcaAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGAc                                                                                    <  2:196972/109‑1 (MQ=255)                                                                                                         acgcaAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCAc                                                                                       >  2:1531230/1‑104 (MQ=255)                                                                                                         acgcaAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCAc                                                                                       <  1:1531230/104‑1 (MQ=255)                                                                                                             aagcaaCTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTg                                     <  2:24854/150‑1 (MQ=255)                                                                                                               gcaaCTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTgga                                   <  1:1859601/150‑1 (MQ=255)                                                                                                               gcaaCGGACTCCCGCACAAGGCA‑ACGCTAGCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTCGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTgga                                   <  1:875089/150‑1 (MQ=255)                                                                                                                    tgactgGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTCCAGCATCGCCATCGACACGCTGGAGGATg                              >  2:575156/1‑150 (MQ=255)                                                                                                                      actgGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCTGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTgg                                                                                 >  1:37586/1‑97 (MQ=255)                                                                                                                      actgGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCTGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTgg                                                                                 <  2:37586/97‑1 (MQ=255)                                                                                                                      actgGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATgca                            <  1:52323/150‑1 (MQ=255)                                                                                                                       ctgGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATgcag                           <  2:369256/150‑1 (MQ=255)                                                                                                                          gcgcACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTcc                                                                          >  1:1880931/1‑100 (MQ=255)                                                                                                                          gcgcACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTcc                                                                          <  2:1880931/100‑1 (MQ=255)                                                                                                                            gcACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCacac                      <  2:1724960/150‑1 (MQ=255)                                                                                                                              acaAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACATCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTg                    >  2:599142/1‑150 (MQ=255)                                                                                                                                aaGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACa                                                         >  2:1028515/1‑111 (MQ=255)                                                                                                                                aaGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACa                                                         <  1:1028515/111‑1 (MQ=255)                                                                                                                                 aGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCa                                                      <  1:1316451/113‑1 (MQ=255)                                                                                                                                 aGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCa                                                      >  2:1316451/1‑113 (MQ=255)                                                                                                                                    cA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTGGCGCGa              <  2:1197992/150‑1 (MQ=255)                                                                                                                                           tATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTGGCGCGAGCACTg        <  1:584938/150‑1 (MQ=255)                                                                                                                                           gtttggcctgTTgctcggggccgtgcggccagccccagacgaataggccgatagcgttggcttatgcgccggtcagttgcttccgtgcgagcagccctgccacggtaccccgggcgttggcgctacctgccttggcttgcacattttcgt        >  2:164596‑M1/5‑12 (MQ=255)                                                                                                                                               ggCCTGTTgctcggggccgtgcggccagccccacacgaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcgagcagccctgccacggtaccccgggcgttggcgctgcctgccttggcttgcacatgttcgtccag    <  1:132693‑M1/150‑143 (MQ=255)                                                                                                                                                gCCTGTTgctcggggccgtgcggccagccccacacgaacaggccgatagctttgccttgtgcgccagtcagttgcttgcgtgcgagcagccctgccacggtaccccgggcgttggcgctgcctgccttggcttgcacatgttcgtccagg   <  2:52323‑M1/150‑144 (MQ=255)                                                                                                                                                gCCTGTTgctcggggccgtgcggccagccccacacgaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcgagcagccctgccacgctaccccgggcgttggcgctgcctgccttggcttgcacatgttcgtccagg   <  1:94062‑M1/150‑144 (MQ=255)                                                                                                                                                gCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcgagcagccctgccacggtaccccgggc                                           >  2:37663‑M2/1‑36 (MQ=255)                                                                                                                                                gCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcgagcagccctgccacggtaccccgggc                                           <  1:37663‑M2/110‑75 (MQ=255)                                                                                                                                                 ccTGTTgctcggggccgtgcggccagccccacacgaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcgagcagccctgccacggtaccccgggcgttggcgctgccttccttggcttgcacatgttcgtccaggc  >  2:344079‑M1/1‑6 (MQ=255)                                                                                                                                                   tGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcga                                                                    >  2:28499‑M2/1‑33 (MQ=255)                                                                                                                                                   tGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcga                                                                    <  1:28499‑M2/82‑50 (MQ=255)                                                                                                                                                      |                                                                                                                                                 GTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCA‑ACGCTATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTGGCGCGAGCACTGGTATCG  >  NC_002947/5660943‑5661235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.