| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5745199 | 80 (1.100) | 4 (0.060) | 4/234 | NT | 5.2% | coding (722/2451 nt) | glgP | glycogen phosphorylase |
| ? | NC_002947 | = 5745229 | 71 (1.030) | coding (692/2451 nt) | glgP | glycogen phosphorylase | |||||
GAAAAAGTACTCCTGGCGAAGGCGCAGTTCCTGGCCGGCCTCGGTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5745045‑5745199‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccagcgTCAACACCCTGCGCCTGTGGCGCGCGCGGGCGCTGGAAGAGCTGCACCTGGAGCGCTTCAACGCCGGTGACCATTTGGGGGCTGTGGCTGAAGTGGCGCGTGCCGAGAGCATTTCGCGTGTGCTTTACCCCGCCGACAGTACCGA < NC_002947/5745229‑5745085 GAAAAAGTACTCCTGGCGAAGGCGCAGTTCCTGGCCGGCCTCGGTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTC > 2:1028286/1‑150GAAAAAGTACTCCTGGCGAAGGCGCAGTTCCTGGCCGGCCTCGGTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTC > 2:1724098/1‑150 AAAAGTACTCCTGGCGAAGGCGCAGTTCCTGGCCGGCCTCGGTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCA < 2:85978/150‑1 AAAGTACTCCTGGCGAAGGCGCAGTTCCTGGCCGGCCTCGGTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCtg > 1:109713/1‑148 AAAGTACTCCTGGCGAAGGCGCAGGTCCTGGCCGGCCTCGGTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAG > 1:551909/1‑150 GCGCAGTTCCTGGCCGGCCTCGGTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGTCAACACCCTGCGCCT > 2:194723/1‑150 CTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGTCAACACCCTGCGCCTGTGGCGCGCGCGGGCGCTGGAAGAG < 1:194723/150‑1 GGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGTCAACACCCTGCGCCTGTGGCGCGCGCGGGCGCTGGAA > 1:1133039/1‑138 GGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCGTCAACACCCTGCGCCTGTGGCGCGCGCGGGCGCTGGAA < 2:1133039/138‑1 CAGCGTCAACACCCTGCGCCTGTGGCGCGCGCGGGCGCTGGAAGAGCTGCACCTGGAGCGCTTCAACGCCGGTGACCATTTGGGGGCTGTGGCTGAAGTGGCGCGTGCCGAGAGCATTTCGCGTGTGCTTTACCCCGCCGACAGTACCGA < 1:110167/150‑1 CAGCGTCAACACCCTGCGCCTGTGGCGCGCGCGGGCGCTGGAAGAGCTGCACCTGGAGCGCTTCAACGCCGGTGACCATTTGGGGGCTGTGGCTGAAGTGGCGCGTGCCGAGAGCATTTCGCGTGTGCTTTACCCCGCCGACAGTACCGA < 2:795831/150‑1 GAAAAAGTACTCCTGGCGAAGGCGCAGTTCCTGGCCGGCCTCGGTACTGTCGGCGGGGTAAAGCACACGCGAAATGCTCTCGGCACGCGCCACTTCAGCCACAGCCCCCAAATGGTCACCGGCGTTGAAGCGCTCCAGGTGCAGCTCTTCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5745045‑5745199‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccagcgTCAACACCCTGCGCCTGTGGCGCGCGCGGGCGCTGGAAGAGCTGCACCTGGAGCGCTTCAACGCCGGTGACCATTTGGGGGCTGTGGCTGAAGTGGCGCGTGCCGAGAGCATTTCGCGTGTGCTTTACCCCGCCGACAGTACCGA < NC_002947/5745229‑5745085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |