| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5786528 = | 92 (1.260) | 6 (0.100) | 5/200 | NT | 7.5% | intergenic (+15/‑116) | PP_5068/trxC | hypothetical protein/thioredoxin |
| ? | NC_002947 | 5786613 = | 73 (1.240) | intergenic (+100/‑31) | PP_5068/trxC | hypothetical protein/thioredoxin | |||||
AGGCGGTTGAGGCCGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5786696‑5786528‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGAGCA > NC_002947/5786613‑5786761 taaCGGTTGAGGCCGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGC > 1:1523735/4‑150 GCGGTTGAGGCCGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGG < 2:1099204/150‑1 CGGTTGAGGCCGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCATGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGG < 2:1457131/150‑1 TTGAGGCCGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCAC > 1:451685/1‑150 TTGAGGCCGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCAC > 2:727160/1‑150 GAGGCCGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGC > 1:1132520/1‑150 AGGCCGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCC > 1:923404/1‑150 AGGCCGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGG < 2:599263/143‑1 AGGCCGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGG > 1:599263/1‑143 CGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCT < 2:1816290/150‑1 GTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTC < 2:923404/150‑1 TTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCTCGGGCACGCCCGCTCC > 2:1595197/1‑150 AGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGACCCCGGTTTCCTTGTGGGAGGGTGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACA > 1:1693423/1‑150 ATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCG < 1:560955/110‑1 ATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCG > 2:560955/1‑110 TGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGG > 2:784902/1‑68 TGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGG < 1:784902/68‑1 GTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAA > 1:176088/1‑150 CCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAAACCGTGAACCCAACACCGGAG < 1:1534984/94‑1 CCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAAACCGTGAACCCAACACCGGAG > 2:1534984/1‑94 CCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGC > 2:492306/1‑135 CCGCGAACACAGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGC < 1:492306/135‑1 ACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACA > 1:1258755/1‑60 ACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACA < 2:1258755/60‑1 TGCCTGCTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCG < 2:176088/150‑1 atgGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTG > 2:964645/4‑150 TTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTG > 1:1352175/1‑150 TCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGCACCCCGCACCTGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGC < 2:1910851/150‑1 GCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAA > 2:1187736/1‑150 GCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCC < 1:1722966/80‑1 GCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCC > 2:1722966/1‑80 GGCACGGCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAA < 1:1099204/150‑1 CACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGG < 2:230943/150‑1 CACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGG < 1:1285774/150‑1 ACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGA > 1:523360/1‑150 GCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCACACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATG > 1:1512216/1‑150 CCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTG < 1:1748210/150‑1 CGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGC < 1:421764/150‑1 TCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGT < 2:73864/150‑1 CCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTT < 2:1104918/150‑1 CACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGATGGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGA < 1:1108479/150‑1 AAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAATGGATGTGCTGTTGAGCA < 2:996897/150‑1 AAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGagatcgg > 1:306465/1‑143 AAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGAGCA < 1:803288/150‑1 AGGCGGTTGAGGCCGTTGCAGTGGGGGCAGGGGATTACCAGTGGGTCGGTCATTTCATCTCCGGTGTTGGGTTCACGGTTTCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCAATCCATCACGTTGCCTGCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5786696‑5786528‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGCTGCAAAAAGGATGTGCTGTTGAGCA > NC_002947/5786613‑5786761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |