New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5786528 =92 (1.260)6 (0.100) 5/200 NT 7.5% intergenic (+15/‑116) PP_5068/trxC hypothetical protein/thioredoxin
?NC_002947 5786613 = 73 (1.240)intergenic (+100/‑31) PP_5068/trxC hypothetical protein/thioredoxin

Only 100 of 139 total aligned reads displayed.

GCGGGGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACT  >  NC_002947/5786379‑5786677
                                                                                                                                                     |                                                                                                                                                      
tgctcaacagcacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctt                                                                                                                                                        <  1:803288‑M1/1‑1 (MQ=255)
tgctcaacagcacatccattttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctt                                                                                                                                                        <  2:996897‑M1/1‑1 (MQ=255)
ccgatctcagcacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctt                                                                                                                                                        >  1:306465‑M1/150‑150 (MQ=255)
 cGGGGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCtg                                                                                                                                                       <  1:1133392/150‑1 (MQ=255)
  gggggACTACAGTGAAGTTCGACGGCTGCACCAAGTCCAGCAGGGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCtgt                                                                                                                                                      <  1:1476719/150‑1 (MQ=255)
   ggggACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCtgtg                                                                                                                                                     <  1:986112/150‑1 (MQ=255)
   ggggACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATCAGCGCCGAATCCtgtg                                                                                                                                                     <  1:1508615/150‑1 (MQ=255)
     aacagcacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTggg                                                                                                                                                   <  2:1104918‑M1/6‑1 (MQ=255)
      acagcacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGa                                                                                                                                                  <  2:73864‑M1/7‑1 (MQ=255)
         gcacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCg                                                                                                                                               <  1:421764‑M1/10‑1 (MQ=255)
          cacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCgg                                                                                                                                              <  1:1748210‑M1/11‑1 (MQ=255)
          aCAGTGAAGTTCGACGGCTGCACCAAGTCCTGGTCAGGCCTTGCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGGGGGAGCgg                                                                                                                                              <  2:280532/150‑1 (MQ=255)
            catcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgtgggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGc                                                                                                                                            >  1:1512216‑M1/138‑150 (MQ=255)
            aGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGc                                                                                                                                            <  2:1081348/150‑1 (MQ=255)
            aGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTGCCTGATTAGCCCCGAATCCTGTGGGACCGGGc                                                                                                                                            >  2:92678/1‑150 (MQ=255)
              tGAAGTTCGACGCCTCCACCAAGTCCGGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCCGGCgg                                                                                                                                          >  2:227120/1‑149 (MQ=255)
               cctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTg                                                                                                                                         <  1:1285774‑M1/16‑1 (MQ=255)
               cctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTg                                                                                                                                         <  2:230943‑M1/16‑1 (MQ=255)
                aaGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGc                                                                                                                                        <  1:1084128/150‑1 (MQ=255)
                 tttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGCCGTGcc                                                                                                                                       <  1:1099204‑M1/18‑1 (MQ=255)
                    tCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCcgc                                                                                                                                    <  2:834004/150‑1 (MQ=255)
                            tGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGACAAGCACCTGGAAATCAGCTGCTCTTCCTGATAAGCGCCGAATCCGGTTCGTGCGGGCGTGCCCGCGAAG‑CAgg                                                                                                                           >  2:803288/1‑150 (MQ=255)
                              cgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCa                                                                                                                         <  2:176088‑M1/31‑1 (MQ=255)
                               aCCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCaa                                                                                                                        >  1:1707799/1‑150 (MQ=255)
                                          gCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGAtt                                                                                                             >  2:404991/1‑150 (MQ=255)
                                          gCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGAtt                                                                                                             <  2:229402/150‑1 (MQ=255)
                                                  tttCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGAt                                                                                                              >  1:1594252/1‑141 (MQ=255)
                                                  tttCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGAt                                                                                                              <  2:1594252/141‑1 (MQ=255)
                                                  tttCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGc                                                                                                     >  1:1358382/1‑150 (MQ=255)
                                                      gAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCg                                                                                                 >  2:1132520/1‑150 (MQ=255)
                                                       aGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGc                                                                                                <  2:591534/150‑1 (MQ=255)
                                                           aCAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCACGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCggg                                                                                            >  1:1558135/1‑149 (MQ=255)
                                                               cccGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTc                                                                                        <  2:1427060/150‑1 (MQ=255)
                                                                 cGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCgg                                                                                                      >  2:1121930/1‑134 (MQ=255)
                                                                 cGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCgg                                                                                                      <  1:1121930/134‑1 (MQ=255)
                                                                   ggATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCgg                                                                                    <  2:1358382/150‑1 (MQ=255)
                                                                       ttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCAc                                                                                >  1:176088‑M1/79‑150 (MQ=255)
                                                                       gCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCAc                                                                                <  1:1616250/150‑1 (MQ=255)
                                                                              taggCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCt                                                                         >  1:1937628/4‑150 (MQ=255)
                                                                                 gCCGAGGGGCCGCCGGGGTGGGGCAGGGACCTGGAAGTCAGGTGGTGTTCGTGATTAGCGCCGAATCCTTTGGGTGTGTGCTCACGCG‑GAAGACGGCCTACGAGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTccc                                                                      <  1:1654351/150‑1 (MQ=12)
                                                                                 gCCGAGGGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTccc                                                                      <  2:501680/150‑1 (MQ=255)
                                                                                 gCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTccc                                                                      <  2:1087639/150‑1 (MQ=255)
                                                                                  gcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCTGTGTTCGCgg                                                                                    <  1:492306‑M1/68‑1 (MQ=255)
                                                                                  gcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCgg                                                                                    >  2:492306‑M1/68‑135 (MQ=255)
                                                                                   cGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCATGTGGAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCcac                                                                    <  1:1573495/150‑1 (MQ=255)
                                                                                    gAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCcaca                                                                   >  1:1773307/1‑150 (MQ=255)
                                                                                      gCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAg                                                                 >  2:1309615/1‑150 (MQ=255)
                                                                                          ggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCcgc                                                                                                                                    >  2:1722966‑M1/60‑80 (MQ=255)
                                                                                          ggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCcgc                                                                                                                                    <  1:1722966‑M1/21‑1 (MQ=255)
                                                                                           cgccgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCACGGGCACGCCCGCTCCCACAAGGAAAc                                                            >  1:416498/1‑150 (MQ=255)
                                                                                            gccgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTcgcg                                                                                     >  1:839673/1‑124 (MQ=255)
                                                                                            gccgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTcgcg                                                                                     <  2:839673/124‑1 (MQ=255)
                                                                                            gccgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAAcc                                                           >  1:1104918/1‑150 (MQ=255)
                                                                                            gccgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTAATGGTTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAAcc                                                           >  2:1523735/1‑150 (MQ=255)
                                                                                                 aGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCTCACAAGGAAACCGTGaa                                                      <  2:172818/150‑1 (MQ=255)
                                                                                                 aGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGaa                                                      <  1:817030/150‑1 (MQ=255)
                                                                                                 aGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGaa                                                      >  2:1926922/1‑150 (MQ=255)
                                                                                                    ggggCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAccc                                                   <  1:1926922/150‑1 (MQ=255)
                                                                                                     gggCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGgt                                                                                            >  2:1705774/1‑108 (MQ=255)
                                                                                                     gggCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCa                                                  >  2:1635875/1‑150 (MQ=255)
                                                                                                           gCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCg                                            >  2:1693423/1‑150 (MQ=255)
                                                                                                              ccTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGgag                                         >  1:230943/1‑150 (MQ=255)
                                                                                                               cTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGgaga                                        <  1:1082191/150‑1 (MQ=255)
                                                                                                                tGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAcc                                                    <  1:1057849/137‑1 (MQ=255)
                                                                                                                tGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGAt                                       >  1:487166/1‑150 (MQ=255)
                                                                                                                       cAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATga                                <  2:1885316/150‑1 (MQ=255)
                                                                                                                        aGCTGCTCTTTCTGACTAGCGCCCAATCCGGTGAGAGCGGGCGTGCCCGCTAAG‑CAGGCAACTTGATGGATTTCACCGGCTTCGCAGGTGTTCCCGGGCACCACCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgac                               <  1:1941849/150‑1 (MQ=255)
                                                                                                                         gctgctCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATga                                >  2:62242/1‑148 (MQ=255)
                                                                                                                         gctgctCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATga                                <  1:62242/148‑1 (MQ=255)
                                                                                                                          ctgctCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgacgg                             >  1:1396164/1‑148 (MQ=255)
                                                                                                                            gctCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCACCCACAAGGAAACCGTGAACCCAACACCGGAGAGGAAATgaccgac                           >  1:898664/1‑150 (MQ=255)
                                                                                                                              tctTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTccc                                                                      <  2:296221/105‑1 (MQ=255)
                                                                                                                              tctTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTccc                                                                      >  1:296221/1‑105 (MQ=255)
                                                                                                                                ttCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCAc                       >  2:1548492/1‑150 (MQ=255)
                                                                                                                                   cTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAccc                                                   >  2:192848/1‑119 (MQ=255)
                                                                                                                                   cTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgacc                              >  1:1440863/1‑140 (MQ=255)
                                                                                                                                   cTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgacc                              <  2:1440863/140‑1 (MQ=255)
                                                                                                                                   cTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACAGGAGATGAAATGACCGACCCACTg                     <  2:391068/149‑1 (MQ=255)
                                                                                                                                   cTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACAGGAGATGAAATGACCGACCCACTg                     >  1:391068/1‑149 (MQ=255)
                                                                                                                                     gATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGAt                                                                                                              <  2:955622/58‑1 (MQ=255)
                                                                                                                                     gATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGAt                                                                                                              >  1:955622/1‑58 (MQ=255)
                                                                                                                                       ttAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTg                     <  2:306481/145‑1 (MQ=255)
                                                                                                                                           cgcCGAATCCTGTGGGAGCGGGCGTGCCAGCGAAG‑CAGGCAACGTGATGTATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGAACCACTGGGAATcgcc            >  2:1191958/1‑150 (MQ=37)
                                                                                                                                             ccGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgac                               >  1:505197/1‑129 (MQ=255)
                                                                                                                                             ccGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgac                               <  2:505197/129‑1 (MQ=255)
                                                                                                                                             ccGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTg                     <  2:892544/139‑1 (MQ=255)
                                                                                                                                             ccGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTg                     >  1:892544/1‑139 (MQ=255)
                                                                                                                                              cGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGc         >  1:1101134/1‑150 (MQ=255)
                                                                                                                                                aaTCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGccc       >  1:727160/1‑150 (MQ=255)
                                                                                                                                                 aTCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCCCTGGTCATCCCCTTcccc      >  2:1894356/1‑150 (MQ=255)
                                                                                                                                                  tCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCCACGGGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGccccc     >  1:1910851/1‑150 (MQ=255)
                                                                                                                                                  tCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAg                                                                 >  2:983575/1‑90 (MQ=255)
                                                                                                                                                  tCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAg                                                                 <  1:983575/90‑1 (MQ=255)
                                                                                                                                                  tCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGccccc     >  1:1287762/1‑150 (MQ=255)
                                                                                                                                                   ccTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCa    <  2:762855/150‑1 (MQ=255)
                                                                                                                                                    cTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCgg                                                                                    >  1:1456350/1‑69 (MQ=255)
                                                                                                                                                    cTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCgg                                                                                    <  2:1456350/69‑1 (MQ=255)
                                                                                                                                                     TGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGgt                                                                                            <  2:1258755‑M1/60‑1 (MQ=255)
                                                                                                                                                     TGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGgt                                                                                            >  1:1258755‑M1/1‑60 (MQ=255)
                                                                                                                                                     TGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCACCCTCCCACAAGGAAACCGGGGTCCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACt  >  1:1693423‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GCGGGGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAG‑CAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACT  >  NC_002947/5786379‑5786677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.