| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5918398 | 80 (1.100) | 5 (0.080) | 4/214 | NT | 5.6% | intergenic (+32/+63) | ygiF/PP_5188 | thiamine triphosphatase/AsnC/Lrp family transcriptional regulator |
| ? | NC_002947 | = 5918438 | 99 (1.570) | intergenic (+72/+23) | ygiF/PP_5188 | thiamine triphosphatase/AsnC/Lrp family transcriptional regulator | |||||
CTTGTACGGCGACCTGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5918234‑5918398‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtaaacccgcGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCCTTGAGCAGGTGCTTCCAGCCGCGGCTCTGGTCCACCGCCCGAGCCTGTTCGATACGCGCTTCCAGCACT < NC_002947/5918438‑5918291 CTTGTACGGCGACCTGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTT > 1:1131486/1‑150 GTACGGCGACCTGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGC > 2:390101/1‑150 ACGGCGACCTGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGG > 1:1225270/1‑150 ACGGCGACCTGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGG < 1:1246988/150‑1 CGGCGACCTGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGG > 1:1433314/1‑150 GACCTGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCTGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAA > 1:663456/1‑150 CTGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCC > 2:213207/1‑150 CTGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCC > 2:171150/1‑150 TGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCG > 2:1557858/1‑150 TGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCG > 1:943409/1‑150 CGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCGCCTACACCGGC < 2:943409/150‑1 GCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGG < 2:1194165/121‑1 GCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGG > 1:1194165/1‑121 GATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTA > 2:1816453/1‑150 GCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGG < 1:1816453/150‑1 GCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCCGCTTCGCGGGTAAACCCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGG < 2:1479126/150‑1 TGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTT < 2:478333/150‑1 GTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGG > 2:1806864/1‑85 GTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGG < 1:1806864/85‑1 GCGGGTAAACCCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCCTTGAGCAGGTGCTTCCAGCCGCGGCTCTGGTCCACCGCCCGAGCCTGTTCGATACGC > 2:1433314/1‑150 GTAAACCCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCCTT > 1:73248/1‑91 GTAAACCCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCCTT < 2:73248/91‑1 TAAACCCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCCTTGAGCAGGTGCTTCCAGCCGCGGCTCTGGTCCACCGCCCGAGCCTGTTCGATACGCGCTTC < 2:201620/150‑1 TAAACCCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCCTTGAGCAGGTGCTTCCAGCCGCGGCTCTGGTCCACCGCCCGAGCCTGTTCGATACGCGCTTC < 1:1376082/150‑1 CCCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCC < 1:571596/84‑1 CCCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCC > 2:571596/1‑84 CCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCCTTGAGCAGGTGCTTCCAGCCGCGGCTCTGGTCCACCGCCCGAGCCTGTTCGATACGCGCTTCCAGCA < 2:1016767/150‑1 CCGCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCCTTGAGCAGGTGCTTCCAGCCGCGGCTCTGGTCCACCGCCCGAGCATGTTCGCTACCCGCGTCCgggc > 2:898949/1‑146 GCGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCCTTGAGCAGGTGCTTCCAGCCGCGGCTCTGGTCCACCGCCCGAGCCTGTTCGATACGCGCTTCCAGCACT > 2:1048185/1‑150 CTTGTACGGCGACCTGAAAAAGCTGCACGAGCTGGCCGAGCAGCCCATCAGCGATGAAGTGCTGGAAGCGCGTATCGAACAGGCTCGGGCGGTGGACCAGAGCCGCGGCTGGAAGCACCTGCTCAAGGCGTGATACCGCGTCGCCTGCTTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5918234‑5918398‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtaaacccgcGCCTACACCGGCCTCACGCCTGGCGCGAACCTTTGTAGGAGCGGGTTTACCCGCGAAGCAGGCGACGCGGTATCACGCCTTGAGCAGGTGCTTCCAGCCGCGGCTCTGGTCCACCGCCCGAGCCTGTTCGATACGCGCTTCCAGCACT < NC_002947/5918438‑5918291 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |