| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5929940 = | 76 (1.040) | 4 (0.060) | 4/232 | NT | 5.8% | coding (504/1224 nt) | visC | ubiquinone biosynthesis oxidoreductase |
| ? | NC_002947 | 5929971 = | 58 (0.850) | coding (473/1224 nt) | visC | ubiquinone biosynthesis oxidoreductase | |||||
AGGACGGCCTGCTGGAGCGCCTGCACGACAGCGACATCGGCCTGCTGGCCAATGCGAGGCTGGAGCAATTGCGTCGCTCGGGCGATGAGTGGCTGCTGACCCTGGCGGATGGCCGGCAACTGCGGGCACCGTTGGTGATCGCTGCCGACGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5930094‑5929940‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggtgccCGCAGTTGCCGGCCATCCGCCAGGGTCAGCAGCCACTCATCGCCCGAGCGACGCAATTGCTCCAGCCTCGCATTGGCCAGCAGGCCGATGTCGCTGTCGTGCAGGCGCTCCAGCAGGCCGTCCTGCACCACCCGGTTCTCGACGA > NC_002947/5929971‑5930115 AGGACGGCCTGCTGGAGCGCCTGCACGACAGCGACATCGGCCTGCTGGCCAATGCGAGGCTGGAGCAATTGCGTCGCTCGGGCGATGAGTGGCTGCTGACCCTGGCGGATGGCCGGCAACTGCGGGCACCGTTGGTGATCGCTGCCGACG > 2:352866/1‑150 CTGGAGCGCCTGCACGACAGCGACATCGGCCTGCTGGCCAATGCGAGGCTGGAGCAATTGCGTCGCTCGGGCGATGAGTGGCTGCTGACCCTGGCGGATGGCCGGCAACTGCGGGCACCGTTGGTGATCGCTGCCGACGGT < 1:1649459/141‑1 CTGGAGCGCCTGCACGACAGCGACATCGGCCTGCTGGCCAATGCGAGGCTGGAGCAATTGCGTCGCTCGGGCGATGAGTGGCTGCTGACCCTGGCGGATGGCCGGCAACTGCGGGCACCGTTGGTGATCGCTGCCGACGGT > 2:1649459/1‑141 GAGCAATTGCGTCGCTCGGGCGATGAGTGGCTGCTGACCCTGGCGGATGGCCGGCAACTGCGGGCACCGTTGGTGATCGCTGCCGACGG < 1:1052975/89‑1 GAGCAATTGCGTCGCTCGGGCGATGAGTGGCTGCTGACCCTGGCGGATGGCCGGCAACTGCGGGCACCGTTGGTGATCGCTGCCGACGG > 2:1052975/1‑89 CTGCGGGCACCGTTGGTGATCGCTGCCGACGGTGCCCGCAGTTGCCGGCCATCCGCCAGGGTCAGCAGCCACTCATCGCCCGAGCGACGCAATTGCTCCAGCCTCGCATTG < 1:272099/111‑1 CTGCGGGCACCGTTGGTGATCGCTGCCGACGGTGCCCGCAGTTGCCGGCCATCCGCCAGGGTCAGCAGCCACTCATCGCCCGAGCGACGCAATTGCTCCAGCCTCGCATTG > 2:272099/1‑111 GCACCGTTGGTGATCGCTGCCGACGGTGCCCGCAGTTGCCGGCCATCCGCCAGGGTCAGCAGCCACTCATCGCCCGAGCGACGCAATTGCTCCA < 1:322205/94‑1 GCACCGTTGGTGATCGCTGCCGACGGTGCCCGCAGTTGCCGGCCATCCGCCAGGGTCAGCAGCCACTCATCGCCCGAGCGACGCAATTGCTCCA > 2:322205/1‑94 ACGGTGCCCGCAGTTGCCGGCCATCCGCCAGGGTCAGCAGCCACTCATCGCCCGAGCGACGCAATTGCTCCAGCCTCGCATTGGCCAGCAGGCCGATGTCGCTGTCGTGCAGGCGCTCCAGCAGGCCGTCCTGCACCACCCGGTTCTCGA < 1:1714210/150‑1 ACGGTGCCCGCAGTTGCCGGCCATCCGCCAGGGTCAGCAGCCACTCATCGCCCGAGCGACGCAATTGCTCCAGCCTCGCATTGGCCAGCAGGCCGATGTCGCTGTCGTGCAGGCGCTCCAGCAGGCCGTCCTGCACCACCCGGTTCTCGA < 1:1714287/150‑1 GTGCCCGCAGTTGCCGGCCATCCGCCAGGGTCAGCAGCCACTCATCGCCCGAGCGACGCAATTGCTCCAGCCTCGCATTGGCCAGCAGGCCGATGTCGCTGTCGTGCAGGCGCTCCAGCAGGCCGTCCTGCACCACCCGGTTCTCGACGA > 1:575356/1‑150 AGGACGGCCTGCTGGAGCGCCTGCACGACAGCGACATCGGCCTGCTGGCCAATGCGAGGCTGGAGCAATTGCGTCGCTCGGGCGATGAGTGGCTGCTGACCCTGGCGGATGGCCGGCAACTGCGGGCACCGTTGGTGATCGCTGCCGACGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5930094‑5929940‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggtgccCGCAGTTGCCGGCCATCCGCCAGGGTCAGCAGCCACTCATCGCCCGAGCGACGCAATTGCTCCAGCCTCGCATTGGCCAGCAGGCCGATGTCGCTGTCGTGCAGGCGCTCCAGCAGGCCGTCCTGCACCACCCGGTTCTCGACGA > NC_002947/5929971‑5930115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |