New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6140035	30 (0.410)	4 (0.060)	4/234	NT	12.4%	coding (1184/1473 nt)	cusB	CzcB family copper RND transporter membrane fusion protein
	?	NC_002947	= 6140040	28 (0.410)					coding (1189/1473 nt)	cusB	CzcB family copper RND transporter membrane fusion protein

GATGGTCGCCGAAGACCAAGGCCGTTTCCGCCCAATAGAGGTGGTGCTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6139883‑6140035 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctcaaTACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGGCGGAAACGGCCTTGGTC  <  NC_002947/6140040‑6139896                                                                                                                                                                                                                                                                                                            GATGGTCGCCGAAGACCAAGGCCGTTTCCGCCCAATAGAGGTGGTGCTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCT                                                                                                                                                      >  2:1280753/1‑150    GGTCGCCGAAGACCAAGGCCGTTTCCGCCCAATAGAGGTGGTGCTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGACAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAA                                                                                                                                                   <  2:1727124/150‑1                                                                                                              GTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAAGGGTATTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGA                                                            >  1:1553627/1‑131                                                                                                              GTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAAGGGTATTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGA                                                            <  2:1553627/131‑1                                                                                                                                         TCCGAAGCAAGCCTCAAGGGTATTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAA                                                                    <  1:1401226/96‑1                                                                                                                                         TCCGAAGCAAGCCTCAAGGGTATTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAA                                                                    >  2:1401226/1‑96                                                                                                                                                     CTCAATACCCTTGCGGCTTGCTTCGGAGTCGATCAGGAATTGCCCCGTTGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGGCGGAAACGGCCTTGGTC  >  1:449744/1‑150                                                                                                                                                     CTCAATACCCTTGAGGCTTGCTTCGGAGTCGCTCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGGCGGAAACGGCCTTGGTC  >  1:640658/1‑150                                                                                                                                                     CTCAATACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAG                                                                             <  1:456940/75‑1                                                                                                                                                     CTCAATACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAG                                                                             >  2:456940/1‑75                                                                                                                                                                                                                                                                                                            GATGGTCGCCGAAGACCAAGGCCGTTTCCGCCCAATAGAGGTGGTGCTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6139883‑6140035 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctcaaTACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGGCGGAAACGGCCTTGGTC  <  NC_002947/6140040‑6139896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.