New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1223246	55 (0.750)	6 (0.090)	7/220	NT	10.4%	intergenic (‑31/+35)	PP_1067/gltL	sensor histidine kinase/glutamate/aspartate ABC transporter ATP binding protein
	?	NC_002947	= 1223258	55 (0.850)					intergenic (‑43/+23)	PP_1067/gltL	sensor histidine kinase/glutamate/aspartate ABC transporter ATP binding protein

GCCATTCCCAGGCCGACCATCAGCAGGATGATCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAACTCTTCCTTGGTGCAGTCTTCGATGATGCTGCCCTTGTCCATGA  >  NC_002947/1223097‑1223393                                                                                                                                                      |                                                                                                                                                    gccaTTCCCAGGCCGACCATCAGCAGGATGATCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCC                                                                                                                                                     >  1:1310317‑M1/1‑150 (MQ=255) gccaTTCCCAGGCCGACCATCAGCAGGATGATCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCC                                                                                                                                                     >  2:740435‑M1/1‑150 (MQ=255)     ttCCCAGGCCGACCATCAGCAGGATGATCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCtggt                                                                                                                                                 <  1:1134559/150‑1 (MQ=255)        ccAGGCCGACCATCAGCAGGATGATCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCagggacc                                                                                                                                              >  1:352886‑M1/1‑143 (MQ=255)         cAGGCCGACCATCAGCAGGATGATCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGt                                                                                                                                             >  2:83897/1‑150 (MQ=255)                       gcagGATGATCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCagggacccaccaggcagcggaa                                                                                                                               >  2:627806‑M1/1‑128 (MQ=255)                        cagGATGATCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCagggacccaccaggcagcggaag                                                                                                                              <  1:627806‑M1/150‑24 (MQ=255)                           gatgatCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCAGGGACCCACCAggcagcggaagctg                                                                                                                           >  1:219926‑M2/1‑136 (MQ=255)                              gatCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCtgttc                                                                                                                        <  1:1840499/150‑3 (MQ=255)                                tCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGcc                                                                                                                      >  2:83305/1‑150 (MQ=255)                                  aGTGGTGGTAACAGCAATTGACGGATCCGGCGGGAATACACGATACGATTTGCATGGTGAAGTAGCGAGGGATTCGATGTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCgg                                                                                                                    <  1:1399373/150‑1 (MQ=255)                                  aGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCgg                                                                                                                    <  1:1447102/150‑1 (MQ=255)                                     ggtggtAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCAGGGACCCACCAggcagcggaagctggtcgtaacaa                                                                                                                 >  2:352886‑M2/1‑126 (MQ=255)                                      gtggtAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCtggtg                                                                                                                                                <  2:1870750/118‑1 (MQ=255)                                      gtggtAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCtggtg                                                                                                                                                >  1:1870750/1‑118 (MQ=255)                                      gtggtAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCa                                                                                                                >  2:1512387/1‑150 (MQ=255)                                       tggtAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTggca                                                                                                                                     >  2:1423306‑M2/1‑124 (MQ=255)                                       tggtAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTggca                                                                                                                                     <  1:1423306‑M2/128‑5 (MQ=255)                                           aaCAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGtgct                                                                                                           <  1:951291/150‑1 (MQ=255)                                           aaCAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGtgct                                                                                                           >  1:982833/1‑150 (MQ=255)                                              aGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCtggt                                                                                                                                                 >  1:1606695/1‑109 (MQ=255)                                              aGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCtggt                                                                                                                                                 <  2:1606695/109‑1 (MQ=255)                                              aGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCa                                                                                                        >  1:1018190/1‑150 (MQ=255)                                              aGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCa                                                                                                        >  2:507061/1‑150 (MQ=255)                                              aGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCACCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCa                                                                                                        <  2:282283/150‑1 (MQ=255)                                                cAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAgg                                                                                                      >  1:1438698/1‑150 (MQ=255)                                                   ttGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATc                                                                                                   <  1:863221/150‑1 (MQ=255)                                                      aCGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTg                                                                                                <  1:83897/150‑1 (MQ=255)                                                        ggATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCt                                                                                              <  2:1438698/150‑1 (MQ=255)                                                         gATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTg                                                                                             >  2:940101/1‑150 (MQ=255)                                                          aTCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTga                                                                                            <  2:1310317/150‑1 (MQ=255)                                                          aTCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTga                                                                                            >  1:1764516/1‑150 (MQ=255)                                                             aGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTgagga                                                                                         <  1:507061/150‑1 (MQ=255)                                                               gCGGTAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGaggagg                                                                                       >  1:1902365/1‑150 (MQ=255)                                                                cGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGt                                                                                      <  1:83305/150‑1 (MQ=255)                                                                   gAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCt                                                                                   >  1:60325/1‑150 (MQ=255)                                                                    aaTTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTg                                                                                  <  2:982833/150‑1 (MQ=255)                                                                       tCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGGTGCGTGCTTGTTACCTGACAGCTTAAGCTGTGGCGGGGTCCATGATGAACGCCCAATCTTAGGAGGTGCTGGGt                                                                               >  1:527428/1‑150 (MQ=255)                                                                         aCGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTgc                                                                             >  1:1528270/1‑150 (MQ=255)                                                                             cAGGCTTGGCATGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACCACCAGCTTCCGCTGCCTGGTGTGTCCCTTGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTg                                                                         <  1:134896/150‑1 (MQ=255)                                                                              aGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTACCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTg                                                                         <  1:682573/149‑1 (MQ=255)                                                                              aGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTACCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTg                                                                         >  2:682573/1‑149 (MQ=255)                                                                                 cTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTcg                                                                     >  1:1541506/1‑150 (MQ=255)                                                                                    ggCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGGCCGTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCgg                                                                  <  1:942509/150‑1 (MQ=255)                                                                                    ggCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCgg                                                                  <  1:927901/150‑1 (MQ=255)                                                                                    ggCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCgg                                                                  >  1:757344/1‑150 (MQ=255)                                                                                    ggCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCgg                                                                  <  1:740435/150‑1 (MQ=255)                                                                                     gCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCggg                                                                 >  1:1688459/1‑150 (MQ=255)                                                                                        gggCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGgcgc                                                              >  1:1256895/1‑150 (MQ=255)                                                                                         ggCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCATGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGct                                                             >  2:1031605/1‑150 (MQ=255)                                                                                                     aGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCgaa                                                 <  1:940101/150‑1 (MQ=255)                                                                                                        gATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCgaagaa                                              <  1:47026/150‑1 (MQ=255)                                                                                                          tCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCagggacccaccaggcagc                                                                                                                                   >  1:1104533‑M1/1‑45 (MQ=255)                                                                                                          tCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCagggacccaccaggcagc                                                                                                                                   <  2:1104533‑M1/63‑19 (MQ=255)                                                                                                          tCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGAAGTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAAct                                            >  1:1773096/1‑150 (MQ=255)                                                                                                            gCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGCGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAActct                                          >  2:197752/1‑150 (MQ=255)                                                                                                             cATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAACTCtt                                         <  2:1018190/150‑1 (MQ=255)                                                                                                                 tcatcaCAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAACTCTTCCtt                                     <  2:1186365/150‑1 (MQ=255)                                                                                                                    tcaCAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTggca                                                                                                                                     <  2:305896‑M2/51‑5 (MQ=255)                                                                                                                    tcaCAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTggca                                                                                                                                     >  1:305896‑M2/1‑47 (MQ=255)                                                                                                                          tGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTg                                                                                  >  1:688980/1‑96 (MQ=255)                                                                                                                          tGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTg                                                                                  <  2:688980/96‑1 (MQ=255)                                                                                                                           ggCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGGGCGCTGGTAGCGATTGCTCTGGTCACCGAAGAACTCTTCCTTGGTGCAGTCt                           >  2:1424721/1‑150 (MQ=255)                                                                                                                            gCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCAAGGGTCACCGAAGAACTCTTCCTTGGTGCAGTCtt                          <  1:1424721/150‑1 (MQ=255)                                                                                                                               ttGTTACGACCAGCTTCCGCTGCCtggtgggtccctggcagcggaagctggtcgtaacaaggccactgtgatgaaatgcgatccctcgctacttcgccctgccaagcctgccgtgaattcccgcctgatccgtcaattgctgttaccacc                       >  2:352886‑M1/1‑24 (MQ=255)                                                                                                                               ttGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAACCTGTGGCCGGGTCAGTGCTGCGGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGCAGAACTCTTCCTGCGTGCAGTCTTCga                       >  2:758141/1‑150 (MQ=255)                                                                                                                                  ttACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAACTCTTCCTTGGTGCAGTCTTCgatga                    <  2:1688459/150‑1 (MQ=255)                                                                                                                                      gACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGt                                                        >  2:1300017/1‑110 (MQ=255)                                                                                                                                      gACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGt                                                        <  1:1300017/110‑1 (MQ=255)                                                                                                                                       aCCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAACTCTTCCTTGGTGCAGTCTTCGATGAtgctg               <  2:337193/150‑1 (MQ=255)                                                                                                                                         cAGCTTCCGCTGCCtggtgggtccctggcagcggaagctggtcgtaacaaggccactgtgatgaaatgcgatccctcgctacttcgccctgccaagcctgccgtgaattcccgcctgatccgtcaattgctgttaccaccactgatcatc             >  1:219926‑M1/1‑14 (MQ=255)                                                                                                                                         cAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAACTCTTCCTTGGTGCAGTCTTCGATGATGCTGcc             >  2:358973/1‑150 (MQ=255)                                                                                                                                            cTTCCGCTGCCTGGTGGGTCCCTggcagcggaagctggtcgtaacaaggccactgtgatgaaatgcgatccctcgctacttcgccctgccaagcctgccgtgaattcccgcctgatccgtcaattgctgttaccaccactgatcatcctg          <  1:627806‑M2/150‑128 (MQ=255)                                                                                                                                             ttCCGCTGCCTGGTGGGTCCCTggcagcggaagctggtcgtaacaaggccactgtgatgaaatgcgatccctcgctacttcgccctgccaagcctgccgtgaattcccgcctgatccgtcaattgctgttaccaccactgatcatcctgc         >  2:627806‑M2/1‑22 (MQ=255)                                                                                                                                                cGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAACTCTTCCTTGGTGCAGTCTTCGATGATGCTGCCCTTGTcc      <  2:1471290/150‑1 (MQ=255)                                                                                                                                                 gCTGCCTGGTGGGTCCCTggcagcggaagctggtcgtaacaaggccactgtgatgaaatgcga                                                                                            <  2:1104533‑M2/63‑46 (MQ=255)                                                                                                                                                 gCTGCCTGGTGGGTCCCTggcagcggaagctggtcgtaacaaggccactgtgatgaaatgcga                                                                                            >  1:1104533‑M2/1‑18 (MQ=255)                                                                                                                                                 gCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAACTCTTCCTTGGTGCAGTCTTCGATGATGCTGCCCTTGTCCa     <  2:1541506/150‑1 (MQ=255)                                                                                                                                                 gCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCGCTGGTCACCGAAGAACTCTTCCTTGGTGCAGTCTTCGATGATGCTGCCCTTGTCCa     <  2:1256895/150‑1 (MQ=255)                                                                                                                                                   tGCCagggacccaccaggcagcggaagctggtcgtaacaaggccactgtgatgaaatgcgatccctcgctacttcgccctgccaagcctgccgtgaattcccgcctgatccgtcaattgctgttacca                         >  2:1423306‑M1/1‑4 (MQ=255)                                                                                                                                                   tGCCagggacccaccaggcagcggaagctggtcgtaacaaggccactgtgatgaaatgcgatccctcgctacttcgccctgccaagcctgccgtgaattcccgcctgatccgtcaattgctgttacca                         <  1:1423306‑M1/128‑125 (MQ=255)                                                                                                                                                   tGCCagggacccaccaggcagcggaagctggtcgtaacaaggccactgtga                                                                                                      >  1:305896‑M1/1‑4 (MQ=255)                                                                                                                                                   tGCCagggacccaccaggcagcggaagctggtcgtaacaaggccactgtga                                                                                                      <  2:305896‑M1/51‑48 (MQ=255)                                                                                                                                                    gCCTGGTCGGTACCTGGCCGCGGACGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGGTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAACTCTTCCTTGGTGCAGTCTTCGATGATGCTGCCCTTGTCCATGa  >  2:805247/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                    GCCATTCCCAGGCCGACCATCAGCAGGATGATCAGTGGTGGTAACAGCAATTGACGGATCAGGCGGGAATTCACGGCAGGCTTGGCAGGGCGAAGTAGCGAGGGATCGCATTTCATCACAGTGGCCTTGTTACGACCAGCTTCCGCTGCCTGGTGGGTCCCTGGCAGCGGAAGCTGTGGCCGGGTCAGTGCTGCAGGATCTTGCTGAGGAGGTGCTGGGTGCGCTGGTCGCGGGCGCTCTGGTCACCGAAGAACTCTTCCTTGGTGCAGTCTTCGATGATGCTGCCCTTGTCCATGA  >  NC_002947/1223097‑1223393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.