New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1842441	76 (1.040)	4 (0.060)	4/234	NT	5.5%	coding (2395/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	= 1842465	65 (0.940)					coding (2371/2754 nt)	gacS	sensor protein GacS

CTTCGCGGTCCGTATCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGG  >  NC_002947/1842303‑1842589                                                                                                                                           |                                                                                                                                                     cTTCGCGGTCCGTATCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCg                                                                                                                                           >  2:421313/1‑150 (MQ=255)  ttCGCGGTCCGTATCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCgg                                                                                                                                          <  2:711373/150‑1 (MQ=255)   tCGCGGTCCGTATCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGgt                                                                                                                                         <  2:1577446/150‑1 (MQ=255)   tCGCGGTCCGTATCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGgt                                                                                                                                         <  2:1225677/150‑1 (MQ=255)     gcgGTCCGTATCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGgtgt                                                                                                                                       >  2:1378110/1‑150 (MQ=255)       ggTCCGTATCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGc                                                                                                                                     <  2:373315/150‑1 (MQ=255)          ccGTATCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCa                                                                                                                                  >  2:1615934/1‑150 (MQ=255)          ccGTATCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCa                                                                                                                                  <  2:825418/150‑1 (MQ=255)             tATCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGc                                                                                                                               >  1:561238/1‑150 (MQ=255)              aTCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTGCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCt                                                                                                                              <  2:957881/150‑1 (MQ=255)                 cAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAgg                                                                                                                                >  2:1335160/1‑145 (MQ=255)                 cAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAgg                                                                                                                                <  1:1335160/145‑1 (MQ=255)                   gggAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTcaggc                                                                                                                         >  2:1882234‑M2/1‑145 (MQ=255)                    ggAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTcaggcc                                                                                                                        <  2:868928‑M2/150‑7 (MQ=255)                        gCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTc                                                                                                                    <  2:630213/150‑1 (MQ=255)                         ccAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTcc                                                                                                                   >  2:1028070/1‑150 (MQ=255)                          cagcagCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCa                                                                                                                  >  1:1428877/1‑150 (MQ=255)                           agcagcATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTcatgccgttcccc                                                                                                                 <  2:110985‑M2/150‑14 (MQ=255)                           agcagcATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCAc                                                                                                                 <  1:1274338/150‑1 (MQ=255)                           agcagcATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCAc                                                                                                                 <  1:854204/150‑1 (MQ=255)                           agcagcATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCAc                                                                                                                 <  2:683005/150‑1 (MQ=255)                                caTGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTtcat                                                                                                            <  1:1520905/150‑1 (MQ=255)                                     tCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATcacca                                                                                                       >  1:779643/1‑150 (MQ=255)                                         cATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTg                                                                                                   >  2:1100104/1‑150 (MQ=255)                                          aTGTCAGCCGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTgg                                                                                                  <  1:207613/150‑1 (MQ=255)                                           tGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTggg                                                                                                 <  1:64116/150‑1 (MQ=255)                                               aGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAg                                                                                             <  1:1378110/150‑1 (MQ=255)                                                 cGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGtt                                                                                           <  1:110985/150‑1 (MQ=255)                                                   gCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGcc                                                                                                                                    <  2:207906/107‑1 (MQ=255)                                                   gCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGcc                                                                                                                                    >  1:207906/1‑107 (MQ=255)                                                   gCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGACTCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGc                                                                                         <  2:539183/150‑1 (MQ=255)                                                      aGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGt                                                                                      >  1:1345576/1‑150 (MQ=255)                                                       gATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGtt                                                                                     <  1:486783/150‑1 (MQ=255)                                                            gCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGagcctgggcacaccgcagcaggcgcagg                                                                                                                          >  1:951376‑M1/1‑80 (MQ=255)                                                            gCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGagcctgggcacaccgcagcaggcgcagg                                                                                                                          <  2:951376‑M1/108‑29 (MQ=255)                                                             ccTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCg                                                                                                                                           >  2:1409131/1‑90 (MQ=255)                                                             ccTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCg                                                                                                                                           <  1:1409131/90‑1 (MQ=255)                                                              cTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGAt                                                                              <  1:868928/150‑1 (MQ=255)                                                                  ccggCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTc                                                                                                                    >  2:1530242/4‑108 (MQ=255)                                                                  ccAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTc                                                                                                                    <  1:1530242/108‑1 (MQ=255)                                                                  ccAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCg                                                                                       <  2:101178/137‑1 (MQ=255)                                                                  ccAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCg                                                                                       >  1:101178/1‑137 (MQ=255)                                                                   cAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGGAGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGtt                                                                         >  1:1107981/1‑150 (MQ=255)                                                                    aGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGttt                                                                        <  2:1428877/150‑1 (MQ=255)                                                                      cggcacggCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTgg                                                                      <  2:1107981/144‑1 (MQ=255)                                                                             gcgcAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTa                                                               <  2:1757380/150‑1 (MQ=255)                                                                                cAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGTTCAGGCCGGTCCACGTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAgtc                                                            <  2:91195/150‑1 (MQ=255)                                                                                  ggCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAgtcgt                                                          >  1:1144368/1‑150 (MQ=255)                                                                                   gCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGTTTTTCCTGCGCCTGCTGCGGTGTGCCCAGGCTTAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAgtcgtc                                                         <  1:610859/150‑1 (MQ=255)                                                                                   gCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAgtcgtc                                                         <  1:1100104/150‑1 (MQ=255)                                                                                     ccTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCa                                                       >  2:1501420/1‑150 (MQ=255)                                                                                        ctTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGagcctgggcacaccgcagcaggcgcaggccgagctgctga                                                                                                              >  1:1226076‑M1/1‑52 (MQ=255)                                                                                        ctTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGagcctgggcacaccgcagcaggcgcaggccgagctgctga                                                                                                              <  2:1226076‑M1/92‑41 (MQ=255)                                                                                         ttCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGc                                                                                                                                     >  2:1223438/1‑68 (MQ=255)                                                                                         ttCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGc                                                                                                                                     <  1:1223438/68‑1 (MQ=255)                                                                                            ggggTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCt                                                <  1:1028070/150‑1 (MQ=255)                                                                                             gggTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCgg                                                                           <  2:1747162/122‑1 (MQ=255)                                                                                             gggTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCgg                                                                           >  1:1747162/1‑122 (MQ=255)                                                                                             gggTCGAGTACCTTCAGTTCGTCGCCGTAAGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCtg                                               >  1:1022110/1‑150 (MQ=255)                                                                                              ggTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCtgt                                              <  2:561238/150‑1 (MQ=255)                                                                                              ggTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCtgt                                              <  1:1615934/150‑1 (MQ=255)                                                                                                  gAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCGGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGcaa                                          >  2:1811972/1‑150 (MQ=255)                                                                                                    gTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGcaaca                                        >  2:1146253/1‑150 (MQ=255)                                                                                                     tACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGcaacaa                                       >  1:204188/1‑150 (MQ=255)                                                                                                       ccTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAAcg                                     >  2:595159/1‑150 (MQ=255)                                                                                                          tCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAAcgcgc                                  >  1:1035142/1‑150 (MQ=255)                                                                                                           cAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAAcgcgcg                                 >  1:1076544/1‑150 (MQ=255)                                                                                                             gTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTtcat                                                                                                            >  2:98380/1‑73 (MQ=255)                                                                                                             gTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTtcat                                                                                                            <  1:98380/73‑1 (MQ=255)                                                                                                               tcgtcgCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGtttt                             <  2:152439/150‑1 (MQ=255)                                                                                                                cgtcgCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGttttt                            <  1:1146253/150‑1 (MQ=255)                                                                                                                 gtcgCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTc                           <  1:1257044/150‑1 (MQ=255)                                                                                                                 gtcgCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTc                           <  2:1076544/150‑1 (MQ=255)                                                                                                                   cgCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTCGt                         <  1:1501420/150‑1 (MQ=255)                                                                                                                    gCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTCGtt                        >  2:498587/1‑150 (MQ=255)                                                                                                                      cGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTCGTTgg                      >  1:1711597/1‑150 (MQ=255)                                                                                                                        ttGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTc                           >  1:1144092/1‑143 (MQ=255)                                                                                                                        ttGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTc                           <  2:1144092/143‑1 (MQ=255)                                                                                                                          ggTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCcat                  <  1:1811972/150‑1 (MQ=255)                                                                                                                           gTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCcatg                 <  1:421313/150‑1 (MQ=255)                                                                                                                            tCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTcaggccgagctgctgaccaacggcgacgaactgaaggtactcgaccccgaag                                                                          <  2:1226076‑M2/92‑53 (MQ=255)                                                                                                                            tCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTcaggccgagctgctgaccaacggcgacgaactgaaggtactcgaccccgaag                                                                          >  1:1226076‑M2/1‑40 (MQ=255)                                                                                                                              agcagcTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCCGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCcatggca              >  2:1092642/1‑150 (MQ=255)                                                                                                                               ggggaacggcatgagcctgggcacaccgcagcaggcgcaggccgagctgctgaccaacggcgacgaactgaaggtactcgaccccgaagagggcctgcgcctggccgctggcaaggcagatctggccgctgacatgctgagcatgctgct             <  2:110985‑M1/144‑138 (MQ=255)                                                                                                                                    tCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAgtcgt                                                          >  2:728704/1‑100 (MQ=255)                                                                                                                                    tCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAgtcgt                                                          <  1:728704/100‑1 (MQ=255)                                                                                                                                      ggCCTGagcctgggcacaccgcagcaggcgcaggccgagctgctgaccaacggcgacgaactgaaggtactcgaccccgaagagggcctgcgcctggccgctggcaaggcagatctggccgctgacatgctgagcatgctgctggcctcc      <  2:868928‑M1/150‑145 (MQ=255)                                                                                                                                       gCCTGagcctgggcacaccgcagcaggcgcaggccgagctgctgaccaacggcgacgaactgaaggtactcgaccccgaagagggcctgcgcctggccgctggcaaggcagatctggccgctgacatgctgagcatgctgctggcctccc     >  2:1882234‑M1/1‑5 (MQ=255)                                                                                                                                        cctgcgcctgcTGCGGTGTGCCCAGGCTcaggccgagctgctgaccaacggcgacgaactgaaggtactcgaccccgaagagggcctgcgcctggccgctggcaaggc                                              <  2:951376‑M2/108‑81 (MQ=255)                                                                                                                                        cctgcgcctgcTGCGGTGTGCCCAGGCTcaggccgagctgctgaccaacggcgacgaactgaaggtactcgaccccgaagagggcctgcgcctggccgctggcaaggc                                              >  1:951376‑M2/1‑28 (MQ=255)                                                                                                                                         ctgcgcctgcTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATcacca                                                                                                       >  1:159633/1‑50 (MQ=255)                                                                                                                                         ctgcgcctgcTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATcacca                                                                                                       <  2:159633/50‑1 (MQ=255)                                                                                                                                          tgcgcctgcTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCTGTTCGCTGTTCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAgg  <  2:373982/150‑1 (MQ=255)                                                                                                                                          tgcgcctgcTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAgg  <  2:204188/150‑1 (MQ=255)                                                                                                                                           |                                                                                                                                                     CTTCGCGGTCCGTATCCAGGGAGGCCAGCAGCATGCTCAGCATGTCAGCGGCCAGATCTGCCTTGCCAGCGGCCAGGCGCAGGCCCTCTTCGGGGTCGAGTACCTTCAGTTCGTCGCCGTTGGTCAGCAGCTCGGCCTGCGCCTGCTGCGGTGTGCCCAGGCTCAGGCCGGTCCACTTCATCACCACCTGGGCCAGTTGCCGTTCGCTGATCGGTTTGGTCAGGTAGTCGTCCATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGG  >  NC_002947/1842303‑1842589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.