New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2577388	64 (0.880)	6 (0.090)	6/238	NT	8.7%	coding (1050/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 2577405	64 (0.910)					coding (1033/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator

ATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTATCAAGGCTTTTTCCAGGCGCGGCTCGGCA  >  NC_002947/2577241‑2577535                                                                                                                                                    |                                                                                                                                                     atgcAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCAAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCgg                                                                                                                                                    >  1:1935371/4‑150 (MQ=255) aTCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCgg                                                                                                                                                    >  2:498959/1‑150 (MQ=255)      gAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGCCCAGCGGCTGc‑c                                                                                                                                              <  2:998506/150‑1 (MQ=255)         aCAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGATGGGCGAAGGCGAACGAGCCTAGATCATAGCCTATCAGGTCCGACTCCACCAGTCCGGCCGGGATCGCGGCACAGTTTACGGCGACCAGCGGCTGC‑CTgg                                                                                                                                           >  1:1691061/1‑150 (MQ=255)                gCCGTGGGCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCTGCGGTGGACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGgct                                                                                                                                    <  2:58446/150‑1 (MQ=255)                  cGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTgc                                                                                                                                  >  1:1340743‑M2/1‑148 (MQ=255)                    tGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTgctg                                                                                                                                <  2:1899078‑M2/150‑5 (MQ=255)                    tGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGAC‑‑‑Cagccgcgccaggcagccgctggtc                                                                                                                              <  1:1639050‑M1/150‑25 (MQ=255)                            cTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTg                                                                                                                        <  2:944283/150‑1 (MQ=255)                             ttGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCagccgcgccaggcagccgctg                                                                                                                                 <  2:1479971‑M1/141‑22 (MQ=255)                             ttGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCagccgcgccaggcagccgctg                                                                                                                                 >  1:1479971‑M1/1‑120 (MQ=255)                             ttGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGc                                                                                                                       <  1:148202/150‑1 (MQ=255)                               gCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAg                                                                                                                     <  2:135769/150‑1 (MQ=255)                               gCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAg                                                                                                                     <  2:1629459/150‑1 (MQ=255)                                      aGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCAGCCGCGCCAG‑GCAGCCgctggtcgccgtaaactgtgcg                                                                                                              >  2:1369729‑M2/1‑128 (MQ=255)                                        tCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTcgac                                                                                                            >  2:1805245/1‑150 (MQ=255)                                        ccccGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑ATGGCGAGGCTGCTGGCCCGGTGCAGGGCGTcgac                                                                                                            <  1:1371453/149‑1 (MQ=255)                                          ccGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCgg                                                                                                                                      >  2:1758703/1‑122 (MQ=255)                                          ccGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCgg                                                                                                                                      <  1:1758703/122‑1 (MQ=255)                                             ggTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAaca                                                                                                       >  2:1213370/1‑150 (MQ=255)                                                tGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCTACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACActt                                                                                                    <  1:1820947/150‑1 (MQ=255)                                                 gCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACActtc                                                                                                   <  1:498959/150‑1 (MQ=255)                                                  cccTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAgg                                                                                                                    <  1:882111/132‑1 (MQ=255)                                                  cccTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAgg                                                                                                                    >  2:882111/1‑132 (MQ=255)                                                   ccTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACActtctt                                                                                                 <  2:844604/150‑1 (MQ=255)                                                   ccTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACActtctt                                                                                                 >  1:837733/1‑150 (MQ=255)                                                    cTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAac                                                                                                        >  1:1363350/1‑142 (MQ=255)                                                    cTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAac                                                                                                        <  2:1363350/142‑1 (MQ=255)                                                    cTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCttt                                                                                                <  2:1524938/150‑1 (MQ=255)                                                    cTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCttt                                                                                                <  1:1899078/150‑1 (MQ=255)                                                     ttGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTg                                                                                               <  2:1217070/150‑1 (MQ=255)                                                       gtggtgGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGTTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGcc                                                                                             <  1:1569099/150‑1 (MQ=255)                                                              gcgcCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCt                                                                                      <  2:1915899/150‑1 (MQ=255)                                                                   ggTGATCGCGCCTTTGTCATAGGCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCTGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTCCGCCTGTTTc                                                                                 <  2:1691061/150‑1 (MQ=255)                                                                       aaCGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCagccgcgccaggcagccgctggtcgccgtaaact                                                                                                                    <  1:1680863‑M1/112‑35 (MQ=255)                                                                       aaCGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCAGCCGCGCCAG‑GCAGCCgctggtcgccgtaaact                                                                                                                   <  2:1680863‑M2/112‑18 (MQ=255)                                                                           cgcCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCttt                                                                                                <  2:1542653/127‑1 (MQ=255)                                                                           cgcCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCttt                                                                                                >  1:1542653/1‑127 (MQ=255)                                                                              cTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCa                                                                      >  2:280750/1‑150 (MQ=255)                                                                               tttGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCaa                                                                     >  2:386643/1‑150 (MQ=255)                                                                                      tAGCCGAACAGTTCCGACACCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCggg                                                              >  1:1031611/1‑150 (MQ=255)                                                                                         ccGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATg                                                           <  1:1805245/150‑1 (MQ=255)                                                                                           gAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGGCAAGTTCTTCGACCACGCTTGTTTTGCCCGCGACCAACACCGGGATGTc                                                         <  1:1213370/150‑1 (MQ=255)                                                                                           gAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTc                                                         >  1:1730363/1‑150 (MQ=255)                                                                                           aaaCAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTc                                                         <  2:1935371/149‑1 (MQ=255)                                                                                             aCAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACAAAACCCgggtgtagcg                                                       >  2:1107337/1‑143 (MQ=255)                                                                                             aCAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTAGACGAAGACTTCTTTGCCTCACCCAGTCTCGCCCTCGACCAACACCGGGATGTCCt                                                       >  2:990290/1‑150 (MQ=255)                                                                                                 ttCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCCGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTc                                                   >  1:24668/1‑150 (MQ=255)                                                                                                 ttCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCCGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTc                                                   <  2:24668/150‑1 (MQ=255)                                                                                                  tCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTcc                                                  <  1:280750/150‑1 (MQ=255)                                                                                                    cGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCaa                                                >  2:1065982/1‑150 (MQ=255)                                                                                                     gACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAAt                                               <  1:1065982/150‑1 (MQ=255)                                                                                                      aCTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGaa                                                                                                         >  2:932835/1‑91 (MQ=255)                                                                                                      aCTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGaa                                                                                                         <  1:932835/91‑1 (MQ=255)                                                                                                        tCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGc                                            >  1:1566442/1‑150 (MQ=255)                                                                                                           accaGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAgg                                         >  1:1281560/1‑150 (MQ=255)                                                                                                           accaGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAgg                                         >  1:980755/1‑150 (MQ=255)                                                                                                              aGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTACAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGCGATGTCCTTTTACAATAGCAGAccc                                      >  2:109621/1‑149 (MQ=255)                                                                                                                  cGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCtt                                  <  1:151058/150‑1 (MQ=255)                                                                                                                      cGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCg                                                                                <  2:1283676/100‑1 (MQ=255)                                                                                                                      cGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCg                                                                                >  1:1283676/1‑100 (MQ=255)                                                                                                                      cGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTAt                              <  2:1256673/150‑1 (MQ=255)                                                                                                                          aTCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGGAGGCCGGGATGTAGCagg                          >  1:583533/1‑148 (MQ=255)                                                                                                                              ccgcACAGTTTACGGCGACCAGCGTCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTATCAAGGCtt                      >  2:1089766/1‑150 (MQ=255)                                                                                                                               cgcACAGTTTACGGCGACCAGCggctgcctggcgcggctgctggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgttcaccggcgcccaccacaagggcaacccgggact                      >  2:1369729‑M1/1‑22 (MQ=255)                                                                                                                               cgcACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCCCGGCCAACGCCGAGTTGTCCTTTTGCAATAGCAGGCCGGCTTGTATCAAGCCttt                     >  1:1099834/1‑150 (MQ=255)                                                                                                                                 cacaGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTATCAAGGCttttt                   >  2:1127114/1‑150 (MQ=255)                                                                                                                                    aGTTTACGGCGACCAGCggctgcctggcgcggctgctggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgtt                                                       <  2:1680863‑M1/112‑96 (MQ=255)                                                                                                                                    aGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTgctggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgtt                                                      <  1:1680863‑M2/112‑79 (MQ=255)                                                                                                                                      tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCtttt                                                    <  1:344714/112‑1 (MQ=255)                                                                                                                                      tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCtttt                                                    >  2:344714/1‑112 (MQ=255)                                                                                                                                      tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCtttt                                                    >  1:1166336/1‑112 (MQ=255)                                                                                                                                      tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCtttt                                                    <  2:1166336/112‑1 (MQ=255)                                                                                                                                      tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGc                                    <  1:431630/128‑1 (MQ=255)                                                                                                                                      tttACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGc                                    >  2:431630/1‑128 (MQ=255)                                                                                                                                           ggCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGACGTCGACGAACACTCCTTTGCCTACGCCTGTTTCGACCTCGACCAACACGGGGATGTCCTTTTCCAATAGCAGGCAGGCTTGTATCACGGCTTTTTCCAGGAGCgg         >  2:97067/1‑150 (MQ=255)                                                                                                                                              gACCAGCGGCTGC‑CTGGCGCGGCTggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgttcaccggcgcccaccacaagggcaacccgggactgatccgcaaggccgacca      <  1:1639050‑M2/150‑127 (MQ=255)                                                                                                                                              gACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCCGACTGCCGCCCGCGAATAGCAGGCCGGCTTGTATCAAGGCTTTTTCCAGGCGCGGCTc      <  1:1107337/150‑1 (MQ=255)                                                                                                                                                 cagcagccgcgccaggcagccgctggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgttcaccggcgcccaccacaagggcaacccgggactgatccgcaaggccgacca    <  2:1899078‑M1/150‑147 (MQ=255)                                                                                                                                                 cAGCGGCTGC‑CTGGCGCGGCTgctggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgttcaccggcgcccaccacaagggcaacccgggactgatccgcaa            >  1:1479971‑M2/1‑21 (MQ=255)                                                                                                                                                 cAGCGGCTGC‑CTGGCGCGGCTgctggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgttcaccggcgcccaccacaagggcaacccgggactgatccgcaa            <  2:1479971‑M2/141‑121 (MQ=255)                                                                                                                                                 cAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTATCAAGGCTTTATACAGGTGCgggacggg   >  2:1379297/1‑144 (MQ=255)                                                                                                                                                 cAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGCGAGTCGACGAACGCTTCTTTGCCTACGCCTGTTTCGCCCTCGAGCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTCGTAGCAAGGCTTTTTCCAAGCTCggaagagc   >  1:646835/1‑144 (MQ=255)                                                                                                                                                   gcagccgcgccaggcagccgctggtcgccgtaaactgtgcggcgatcccggccgaactggtggagtcggaactgttcggctatgacaaaggcgcgttcaccggcgcccaccacaagggcaacccgggactgatccgcaaggccgaccacg  >  1:1340743‑M1/1‑2 (MQ=255)                                                                                                                                                    |                                                                                                                                                     ATCCAGAAACAGGATGCCGTGGTCGGCCTTGCGGATCAGTCCCGGGTTGCCCTTGTGGTGGGCGCCGGTGAACGCGCCTTTGTCATAGCCGAACAGTTCCGACTCCACCAGTTCGGCCGGGATCGCCGCACAGTTTACGGCGACCAGCGGCTGC‑CTGGCGCGGCTGCTGGCCCGGTGCAGGGCGTCGACGAACACTTCTTTGCCTACGCCTGTTTCGCCCTCGACCAACACCGGGATGTCCTTTTCCAATAGCAGGCCGGCTTGTATCAAGGCTTTTTCCAGGCGCGGCTCGGCA  >  NC_002947/2577241‑2577535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.