New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 288957874 (1.010)4 (0.060) 4/238 NT 5.2% coding (543/1413 nt) gabP‑II gamma‑aminobutyrate permease
?NC_002947 = 2889591 74 (1.060)coding (556/1413 nt) gabP‑II gamma‑aminobutyrate permease

TCAGCGTCAACGTGTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTACCATCGCG  >  NC_002947/2889430‑2889725
                                                                                                                                                    |                                                                                                                                                     
tCAGCGTCAACGTGTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAAAGTAAAGCACTACGGTGAGTTCGAGTTTTGGTTTGCCTTTTGCTTGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCg                                                                                                                                                      >  2:218603/1‑150 (MQ=255)
    cGTCAACGTGTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGtgat                                                                                                                                                  <  1:1055287/150‑1 (MQ=255)
     gTCAACGTGTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGtgatg                                                                                                                                                 >  1:1188989/1‑150 (MQ=255)
      tCAACGTGTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGtgatga                                                                                                                                                <  1:1023703/150‑1 (MQ=255)
        aaCGTGTTCGTGCTGGCCACAACCCTGTTGCTTATCACCGTCAACTTCTTCAACGTCAAGCACTACCGCTTCTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAAc                                                                                                                                              <  1:1392846/150‑1 (MQ=255)
        aaCGTGTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAAc                                                                                                                                              >  2:1266306/1‑150 (MQ=255)
         aCGTGTTCGTGCTGGCGACAACCCTGTTGCGGATCACGGTCAACTTCTTCAACGTTAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGATGCCGTGATGAACa                                                                                                                                             >  1:937195/1‑150 (MQ=39)
             gTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTg                                                                                                                                         <  2:1906471‑M2/150‑2 (MQ=255)
                         cacaACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGa                                                                                                                           >  1:712902/1‑150 (MQ=255)
                            aaCCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGt                                                                                                                              <  2:773484/145‑1 (MQ=255)
                            aaCCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGt                                                                                                                              >  1:773484/1‑145 (MQ=255)
                               ccTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCg                                                                                                                     >  2:1893575/1‑150 (MQ=255)
                               ccTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCg                                                                                                                     >  1:1052177/1‑150 (MQ=255)
                                       tGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCa                                                                                                             <  1:218603/150‑1 (MQ=255)
                                       tGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCa                                                                                                             <  1:758894/150‑1 (MQ=255)
                                         aTCACCGTCAACTTCGTCGACGTCAAGCACTACGGTGAGTTCGAGTTGTGGTTCGCCTTGATCAAGGTGATTGCGATCGTGTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGc                                                                                                           <  2:548172/150‑1 (MQ=255)
                                          tCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGcc                                                                                                          >  1:1177372/1‑150 (MQ=255)
                                          tCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGcc                                                                                                          <  2:1188989/150‑1 (MQ=255)
                                             ccGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCAcc                                                                                                       >  1:782019/1‑150 (MQ=255)
                                               gTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGc                                                                                                           <  2:1845684/144‑1 (MQ=255)
                                               gTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGc                                                                                                           >  1:1845684/1‑144 (MQ=255)
                                                  aaCTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCAGATGTTCATCAcggcagccgtacacacga                                                                                                                        <  2:1711646‑M2/129‑19 (MQ=255)
                                                  aaCTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCAGATGTTCATCAcggcagccgtacacacga                                                                                                                        >  1:1711646‑M2/1‑111 (MQ=255)
                                                   aCTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAccg                                                                                                 >  2:1633296/1‑150 (MQ=255)
                                                    cttcttCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAccgc                                                                                                >  2:906717/1‑150 (MQ=255)
                                                     ttcttcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTg                                                                                                                             <  2:428329/121‑1 (MQ=255)
                                                     ttcttcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTg                                                                                                                             >  1:428329/1‑121 (MQ=255)
                                                        ttcAACGTTAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTTCGTGGCATCAGCCACCTCACCGCCGaa                                                                                            <  2:937195/150‑1 (MQ=255)
                                                        ttcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGaa                                                                                            >  1:813937/1‑150 (MQ=255)
                                                        ttcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGaa                                                                                            >  1:1732452/1‑150 (MQ=255)
                                                        ttcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGaa                                                                                            >  1:216916/1‑150 (MQ=255)
                                                         tcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAAc                                                                                                                                              <  2:321812/101‑1 (MQ=255)
                                                         tcAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAAc                                                                                                                                              >  1:321812/1‑101 (MQ=255)
                                                          cAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAgg                                                                                          >  1:24619/1‑150 (MQ=255)
                                                               tCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACGGCCGAAGGCTTCa                                                                                     >  1:870615/1‑150 (MQ=255)
                                                                cAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCAt                                                                                    <  2:813937/150‑1 (MQ=255)
                                                                 aaGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAg                                                                                           <  1:810985/142‑1 (MQ=255)
                                                                 aaGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAg                                                                                           >  2:810985/1‑142 (MQ=255)
                                                                 aaGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATg                                                                                   >  1:1433710/1‑150 (MQ=255)
                                                                  aGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGc                                                                                  <  1:733884/150‑1 (MQ=255)
                                                                   gCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGtg                                                                                                                                                    <  2:1239445/85‑1 (MQ=255)
                                                                   gCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGtg                                                                                                                                                    >  1:1239445/1‑85 (MQ=255)
                                                                   gCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGCTGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGcc                                                                                 >  1:1781865/1‑150 (MQ=255)
                                                                   gCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTgg                                                                                                                                        <  2:1759816‑M2/97‑3 (MQ=255)
                                                                   gCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTgg                                                                                                                                        >  1:1759816‑M2/1‑95 (MQ=255)
                                                                      cTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCaa                                                                              <  2:1433710/150‑1 (MQ=255)
                                                                      cTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCaa                                                                              <  1:1633296/150‑1 (MQ=255)
                                                                       tACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAccgc                                                                                                >  2:1541375/1‑131 (MQ=255)
                                                                       tACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAccgc                                                                                                <  1:1541375/131‑1 (MQ=255)
                                                                                ttcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAg                                                                                                            <  2:940676/110‑1 (MQ=255)
                                                                                ttcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAg                                                                                                            >  1:940676/1‑110 (MQ=255)
                                                                                ttcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAc                                                                                                   >  2:1201247/1‑119 (MQ=255)
                                                                                ttcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCAc                                                                                                   <  1:1201247/119‑1 (MQ=255)
                                                                                ttcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATcacc                                                                    >  2:312866/1‑150 (MQ=255)
                                                                                 tcgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGCTCATCTGGCAGTTCGGTTAAGTTCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATcacca                                                                   <  1:1206360/150‑1 (MQ=255)
                                                                                  cgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATcaccac                                                                  >  1:107163/1‑150 (MQ=255)
                                                                                  cgagttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATcaccac                                                                  <  1:1266306/150‑1 (MQ=255)
                                                                                     gttcTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACtgt                                                               >  2:348097/1‑150 (MQ=255)
                                                                                      ttcTGGTTCGCCTTGATCAAGGGGACTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACtgtg                                                              >  2:871100/1‑150 (MQ=255)
                                                                                          ggTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTgg                                                                                                                                        <  1:1830155‑M2/74‑3 (MQ=255)
                                                                                          ggTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTgg                                                                                                                                        >  2:1830155‑M2/1‑72 (MQ=255)
                                                                                            ttCGCCTTGATCAAGGTGATTGCGATCGGCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGt                                                        >  1:345607/1‑150 (MQ=255)
                                                                                                ccTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCt                                                    >  2:974818/1‑150 (MQ=255)
                                                                                                       cAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCt                                                                                                                                          <  2:1844126/59‑1 (MQ=255)
                                                                                                       cAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCt                                                                                                                                          >  1:1844126/1‑59 (MQ=255)
                                                                                                       cAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCCCCTCACCGCCGAAGGCTTCATGCCCGAGGGCATCACCACTGTGATCGGTGCCTTGCTCgg                                             <  2:712902/150‑1 (MQ=255)
                                                                                                        aaGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGCACATCT‑‑CATCCAGGAAGCAATTGCGTCGAATCAGCCACCTCACCGCCGCAGGCTTCCTGCCAAATGGCATCACCACTGTGATCGGTGCCTTGCTCggg                                            <  1:1893575/150‑1 (MQ=255)
                                                                                                        aaGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCggg                                            <  2:1052177/150‑1 (MQ=255)
                                                                                                         aGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTg                                                                                                                   <  1:564852/78‑1 (MQ=255)
                                                                                                         aGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTg                                                                                                                   >  2:564852/1‑78 (MQ=255)
                                                                                                         aGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCgggg                                           <  1:348097/150‑1 (MQ=255)
                                                                                                         aGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCgggg                                           <  2:782019/150‑1 (MQ=255)
                                                                                                          ggTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACGACTGTCATCGGTGCCTTGCTCggggg                                          >  2:434013/1‑149 (MQ=255)
                                                                                                          ggTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCAGATGTTCATCAcggcagccgtacacacgatcaggaagcagacga                                                                                                         <  2:458766‑M2/88‑34 (MQ=255)
                                                                                                          ggTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCAGATGTTCATCAcggcagccgtacacacgatcaggaagcagacga                                                                                                         >  1:458766‑M2/1‑55 (MQ=255)
                                                                                                           gTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTg                                         <  2:1177372/150‑1 (MQ=255)
                                                                                                            tGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGa                                        <  1:312866/150‑1 (MQ=255)
                                                                                                             gATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGAt                                       >  1:1638537/1‑150 (MQ=255)
                                                                                                                 gCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTc                                   <  2:107163/150‑1 (MQ=255)
                                                                                                                    aTCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCCGGAAACGCTCCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGcc                                >  1:723113/1‑150 (MQ=255)
                                                                                                                     tCGTCTGCTTCCTGATCGTGTGTACGGCTGCCgtgatgaacatctggcagccgtacacacgatcaggaagcagacgatcgcaatcacc                                                                                               >  1:458766‑M1/1‑32 (MQ=255)
                                                                                                                     tCGTCTGCTTCCTGATCGTGTGTACGGCTGCCgtgatgaacatctggcagccgtacacacgatcaggaagcagacgatcgcaatcacc                                                                                               <  2:458766‑M1/88‑57 (MQ=255)
                                                                                                                              tCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGgcg                      >  1:1307434/1‑150 (MQ=255)
                                                                                                                                 tGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGAATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCg                   >  1:371024/1‑150 (MQ=255)
                                                                                                                                 tGATCGAGTGTACGGCACCCGCGATGAACATCTGCCAGCTCGGTGAACTGCGAGGCATCAGCCACCTGACCGCCGAAGGCGTCATGCCCAATAGCATCACCTCTGTGATCAGTGCCTCACTCGGGGTGATGTTCGCCTTCCTCGGCGCCg                   >  2:294864/1‑150 (MQ=255)
                                                                                                                                    tCGTGTGTACGGCTGCCgtgatgaacatctggcagccgtacacacgatcaggaagcagacgatcgcaatcaccttgatcaaggcgaaccagaactcgaactcaccgtagtgcttgacgttgaagaagtt                                       >  1:1711646‑M1/1‑17 (MQ=255)
                                                                                                                                    tCGTGTGTACGGCTGCCgtgatgaacatctggcagccgtacacacgatcaggaagcagacgatcgcaatcaccttgatcaaggcgaaccagaactcgaactcaccgtagtgcttgacgttgaagaagtt                                       <  2:1711646‑M1/129‑113 (MQ=255)
                                                                                                                                      gtgtgtACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATc              <  2:1638537/150‑1 (MQ=255)
                                                                                                                                      gtgtgtACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTAGGCGCCGCAAta              >  1:1614527/1‑149 (MQ=255)
                                                                                                                                          gtACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTa          <  1:974818/150‑1 (MQ=255)
                                                                                                                                          gtACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTa          <  2:345607/150‑1 (MQ=255)
                                                                                                                                                 tGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTACCATcgc   >  2:55754/1‑150 (MQ=255)
                                                                                                                                                   ccagatgttcatcacggcagccgtacacacgatcaggaagcagacgatcgcaatcaccttgatcaaggcgaaccagaactcgaactcaccgtagtgc                                                        >  1:1759816‑M1/1‑2 (MQ=255)
                                                                                                                                                   ccagatgttcatcacggcagccgtacacacgatcaggaagcagacgatcgcaatcaccttgatcaaggcgaaccagaactcgaactcaccgtagtgc                                                        <  2:1759816‑M1/97‑96 (MQ=255)
                                                                                                                                                   ccagatgttcatcacggcagccgtacacacgatcaggaagcagacgatcgcaatcaccttgatcaaggcgaacc                                                                               <  1:1830155‑M1/74‑73 (MQ=255)
                                                                                                                                                   ccagatgttcatcacggcagccgtacacacgatcaggaagcagacgatcgcaatcaccttgatcaaggcgaacc                                                                               >  2:1830155‑M1/1‑2 (MQ=255)
                                                                                                                                                    cagatgttcatcacggcagccgtacacacgatcaggaagcagacgatcgcaatcaccttgatcaaggcgaaccagaactcgaactcaccgtagtgcttgacgttgaagaagttgacggtgatcagcaacagggttgtggccagcacgaac  <  2:1906471‑M1/150‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TCAGCGTCAACGTGTTCGTGCTGGCCACAACCCTGTTGCTGATCACCGTCAACTTCTTCAACGTCAAGCACTACGGTGAGTTCGAGTTCTGGTTCGCCTTGATCAAGGTGATTGCGATCGTCTGCTTCCTGATCGTGTGTACGGCTGCCGTGATGAACATCTGGCAGTTCGGTGAAGTGCGTGGCATCAGCCACCTCACCGCCGAAGGCTTCATGCCCAATGGCATCACCACTGTGATCGGTGCCTTGCTCGGGGTGATGTTCGCCTTCCTCGGCGCCGAAATCGTTACCATCGCG  >  NC_002947/2889430‑2889725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.