New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4240195 =	73 (1.000)	5 (0.080)	5/224	NT	7.2%	coding (139/900 nt)	PP_3717	LuxR family transcriptional regulator
	?	NC_002947	4240236 =	63 (0.960)					coding (98/900 nt)	PP_3717	LuxR family transcriptional regulator

CGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGC  >  NC_002947/4240047‑4240337                                                                                                                                                     |                                                                                                                                                  cGATGCCGTTCGGGGATGCCTTGCTGGTCCAGCAACTGCGGCGCCCGCCCCTGGCACTCCAGGCTGATCATCATCGTCTCCACCTGCACCAACCGGACGATGGCAGCGGCCACACACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGG                                                                                                                                                  <  2:72708‑M1/150‑1 (MQ=255) cGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGG                                                                                                                                                  <  1:1834138‑M1/150‑1 (MQ=255) cGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGG                                                                                                                                                  <  2:1472910‑M1/150‑1 (MQ=255) atcattgagaccgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcccctcccgataccccgcttaccctcacaatgg                                                                                                                                                  >  1:1724341‑M1/149‑150 (MQ=255)    attgagaccgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatgg                                                                                                                                                  >  1:1704604‑M1/146‑147 (MQ=255)    attgagaccgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatgg                                                                                                                                                  <  2:1704604‑M1/2‑1 (MQ=255)     ttgagaccgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGgcgc                                                                                                                                              <  1:1054698‑M1/6‑1 (MQ=255)     ttgagaccgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGgcgc                                                                                                                                              <  1:1396099‑M1/6‑1 (MQ=255)          accgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGc                                                                                                                                         >  2:476643‑M1/140‑150 (MQ=255)             gggATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAc                                                                                                                                      <  1:1209735/150‑1 (MQ=255)                  gCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCAc                                                                                                                              <  2:837031/150‑1 (MQ=255)                    cTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGt                                                                                                                            <  1:1137994/150‑1 (MQ=255)                     ttGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTg                                                                                                                           >  1:187644/1‑150 (MQ=255)                     ttGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGCGTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGt                                                                                                                            >  2:459978/1‑149 (MQ=255)                     ttGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGCATTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGt                                                                                                                            <  1:459978/149‑1 (MQ=255)                          ggTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCAct                                                                                                                      >  2:1104884/1‑150 (MQ=255)                           gTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCActg                                                                                                                     <  2:656989/150‑1 (MQ=255)                              gcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCAAC‑‑‑GCCACGTGCCActgctg                                                                                                                  >  1:1625383‑M1/120‑150 (MQ=255)                              cAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAgcagtggcacgtggcgttg                                                                                                                     <  2:1015842‑M1/150‑20 (MQ=255)                                  aaCTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCtgcagc                                                                                                              >  2:867018‑M2/1‑144 (MQ=255)                                           gcccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCAtt                                                                                                     <  1:1104884/150‑1 (MQ=255)                                           gcccgcccCTGGAACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCAtt                                                                                                     <  2:1764373/150‑1 (MQ=255)                                           caaggccgatgaacctggcacaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatg                                                                                                                                                   >  2:1034515‑M1/107‑107 (MQ=255)                                           caaggccgatgaacctggcacaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatg                                                                                                                                                   <  1:1034515‑M1/1‑1 (MQ=255)                                            cccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGc                                                                                                                          >  1:898995/1‑128 (MQ=255)                                            cccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGc                                                                                                                          <  2:898995/128‑1 (MQ=255)                                             ccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCActgc                                                                                                                    >  1:1679108/1‑133 (MQ=255)                                             ccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCActgc                                                                                                                    <  2:1679108/133‑1 (MQ=255)                                             ccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATtgt                                                                                                   <  2:459880/150‑1 (MQ=255)                                             ccgcccCTGGCACTCAAGGCTGAGCATCATCGACTCCACCGGCACCAACTGGCCGATGGCAGCGGCCACCTACTCCAGCGTCTCGGGGGTTCCACCATGGGCCAGGGCGCCCTGCAAC‑‑‑GCCACGTACCACTGCTGCAGCGCGCCCATtgt                                                                                                   <  1:730439/150‑1 (MQ=255)                                               gccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                 <  2:258868‑M1/48‑1 (MQ=255)                                               gcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAgcagtggcacgtggcgttgcagcgcgccctggccca                                                                                                    >  2:1097278‑M1/1‑114 (MQ=255)                                               gcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                 >  2:1580471/1‑150 (MQ=255)                                                ccccTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAg                                                                                                <  1:277295/150‑1 (MQ=255)                                                 cccTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                               <  2:62280/150‑1 (MQ=255)                                                        aCTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAGCAGTGGCACGTGGC‑‑‑GTtgcagcgcgccctggcccatggtgaaac                                                                                        >  1:1097278‑M2/1‑122 (MQ=255)                                                         cTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCAGAAACAGGCTGCAGCACGGCTTGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGTCCATTGTGAGGGTAAGCgg                                                                                       <  1:1198520/150‑1 (MQ=255)                                                                cTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCg                                                                                <  2:1785820/150‑1 (MQ=255)                                                                  gATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTG                                                                                                                                          <  2:1633647‑M1/93‑1 (MQ=255)                                                                  gATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTG                                                                                                                                          >  1:1633647‑M1/1‑93 (MQ=255)                                                                   atcatcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGga                                                                             >  2:1178958/1‑150 (MQ=255)                                                                     catcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                           >  1:1080292/1‑150 (MQ=255)                                                                     catcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                           <  1:500632/150‑1 (MQ=255)                                                                      atcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGagag                                                                          >  2:1054314/1‑150 (MQ=255)                                                                       tcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTGGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCAAGTGCCACTGGTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAgg                                                                         >  2:842418/1‑150 (MQ=255)                                                                        catcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGc                                                                        <  2:175446/150‑1 (MQ=255)                                                                        catcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACAATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGc                                                                        <  2:1702875/150‑1 (MQ=255)                                                                          tcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCt                                                                      >  2:203488/1‑150 (MQ=255)                                                                          tcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCt                                                                      >  2:1246021/1‑150 (MQ=255)                                                                            gACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGGGATCGGGGGATCGGGAGAGGCCTgg                                                                    >  2:1901249/1‑150 (MQ=255)                                                                               tCCACCTGCACCAACTGGTCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                       <  1:670591/128‑1 (MQ=255)                                                                               tCCACCTGCACCAACTGGTCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                       >  2:670591/1‑128 (MQ=255)                                                                                ccACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCa                                                                <  1:1729316/150‑1 (MQ=255)                                                                                 cACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCAt                                                               <  1:1054314/150‑1 (MQ=255)                                                                                  aCCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                 >  1:1706970/1‑115 (MQ=255)                                                                                  aCCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                 <  2:1706970/115‑1 (MQ=255)                                                                                  aCCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCCTg                                                              <  2:1295717/150‑1 (MQ=255)                                                                                       cACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCgg                                                         <  1:963057/150‑1 (MQ=255)                                                                                         ccAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCa                                                       <  1:572224/150‑1 (MQ=255)                                                                                          cAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                               >  2:986561/1‑109 (MQ=255)                                                                                          cAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                               <  1:986561/109‑1 (MQ=255)                                                                                           aaCTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGt                                                                                             >  2:697228/1‑110 (MQ=255)                                                                                           aaCTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGt                                                                                             <  1:697228/110‑1 (MQ=255)                                                                                           aaCTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGt                                                     <  1:203488/150‑1 (MQ=255)                                                                                               ggCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAg                                                 <  2:1080292/150‑1 (MQ=255)                                                                                                gCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGc                                                >  2:1780815/1‑150 (MQ=255)                                                                                                  cGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCt                                              >  2:561940/1‑150 (MQ=255)                                                                                                      ggCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCTGCAGTCTAGCCTGCCa                                          <  1:1246021/150‑1 (MQ=255)                                                                                                       gCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCTGGCAGGCTAGACTGccgg                                         <  2:276536/150‑3 (MQ=255)                                                                                                       gCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGAAGCGCGCCCATTGCGAGGCTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAg                                         <  1:237581/150‑1 (MQ=255)                                                                                                        cAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                       <  2:1707458/103‑1 (MQ=255)                                                                                                        cAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                       >  1:1707458/1‑103 (MQ=255)                                                                                                         aGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGc                                       <  1:1780815/150‑1 (MQ=255)                                                                                                           cGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGAGGTAAGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAgatcg                                     >  1:990964/1‑146 (MQ=255)                                                                                                            atgacccaggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAgcgc                                                                                                            <  1:459928‑M1/37‑1 (MQ=255)                                                                                                            atgacccaggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAgcgc                                                                                                            >  2:459928‑M1/42‑78 (MQ=255)                                                                                                             gCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGccc                                                                      <  2:966252/115‑2 (MQ=255)                                                                                                             gCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGccc                                                                      >  1:966252/1‑114 (MQ=255)                                                                                                              ccACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCCCGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTaaacg                                                                                        >  2:1254150/1‑93 (MQ=255)                                                                                                              ccACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAACg                                                                                        <  1:1254150/96‑1 (MQ=255)                                                                                                               cacaTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGccc                                 <  1:1178958/150‑1 (MQ=255)                                                                                                                acaTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCcg                                >  2:888152/1‑150 (MQ=255)                                                                                                                  aTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                               <  1:1100065/85‑1 (MQ=255)                                                                                                                  aTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                               >  2:1100065/1‑85 (MQ=255)                                                                                                                   tcagccAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCgcgc                             >  1:1542936/5‑150 (MQ=255)                                                                                                                    aCTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAgcagtggcacgtggcgttg                                                                                                                     <  2:537462‑M1/64‑20 (MQ=255)                                                                                                                    aCTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAgcagtggcacgtggcgttg                                                                                                                     >  1:537462‑M1/1‑45 (MQ=255)                                                                                                                      tCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGcaca                          <  1:1580471/150‑1 (MQ=255)                                                                                                                         aGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGcc                       <  2:1542936/150‑1 (MQ=255)                                                                                                                              cTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTg                  >  1:1329815/1‑150 (MQ=255)                                                                                                                              cTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTg                  >  1:922548/1‑150 (MQ=255)                                                                                                                               tCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTgc                 >  1:1516383/1‑150 (MQ=255)                                                                                                                                   gggTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCa             >  2:1396099/1‑150 (MQ=255)                                                                                                                                   cccgcttaccctcacaatGGGCGCGCTGCAGCAGTGGCACGTGGC‑‑‑GTTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCa             <  1:258868‑M1/132‑1 (MQ=255)                                                                                                                                     gTTTCACCATGGGCCAGGGCGCGCTGCAacgccacgtgccactgctgcagcgcgccctggcccatggtgaaacccccgaggcgctggagtatgtggccgctgccatcggccagttggtgcaggtggagtcgatgatgatcagccttgagt              >  1:1097278‑M1/1‑28 (MQ=255)                                                                                                                                          aCCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCAt      >  2:1054698/1‑150 (MQ=255)                                                                                                                                            cATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                           <  1:869668/79‑1 (MQ=255)                                                                                                                                            cATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                           >  2:869668/1‑79 (MQ=255)                                                                                                                                              tGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCtgcagcgcgccctggcccatggtgaaacccccgaggcgctggagtatgtggccgctgccatcggccagttggtgcaggtggagtcgatgatgatcagccttgagtgccaggggc  >  2:1097278‑M2/1‑36 (MQ=255)                                                                                                                                                     |                                                                                                                                                  CGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGC  >  NC_002947/4240047‑4240337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.