New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4240195 =	73 (1.000)	5 (0.080)	5/224	NT	7.2%	coding (139/900 nt)	PP_3717	LuxR family transcriptional regulator
	?	NC_002947	4240236 =	63 (0.960)					coding (98/900 nt)	PP_3717	LuxR family transcriptional regulator

GCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAATGATGC  >  NC_002947/4240089‑4240385                                                                                                                                                       |                                                                                                                                                      gcccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCAtt                                                                                                                                                     <  1:1104884/150‑1 (MQ=255) gcccgcccCTGGAACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCAtt                                                                                                                                                     <  2:1764373/150‑1 (MQ=255)   ccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATtgt                                                                                                                                                   <  2:459880/150‑1 (MQ=255)   ccgcccCTGGCACTCAAGGCTGAGCATCATCGACTCCACCGGCACCAACTGGCCGATGGCAGCGGCCACCTACTCCAGCGTCTCGGGGGTTCCACCATGGGCCAGGGCGCCCTGCAAC‑‑‑GCCACGTACCACTGCTGCAGCGCGCCCATtgt                                                                                                                                                   <  1:730439/150‑1 (MQ=255)     gccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                                                                 <  2:258868‑M1/48‑1 (MQ=255)     gcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                                                                 >  2:1580471/1‑150 (MQ=255)      ccccTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAg                                                                                                                                                <  1:277295/150‑1 (MQ=255)       cccTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                                                                               <  2:62280/150‑1 (MQ=255)               cTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCAGAAACAGGCTGCAGCACGGCTTGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGTCCATTGTGAGGGTAAGCgg                                                                                                                                       <  1:1198520/150‑1 (MQ=255)                   tggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatgggcgcgctgcaacgccacgtgccactgctgcagcgcgcccATTGTGAGGGTAAGCggg                                                                                                                                      <  1:258868‑M2/18‑1 (MQ=255)                      cTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCg                                                                                                                                <  2:1785820/150‑1 (MQ=255)                         atcatcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGga                                                                                                                             >  2:1178958/1‑150 (MQ=255)                           catcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                                                                           >  1:1080292/1‑150 (MQ=255)                           catcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                                                                           <  1:500632/150‑1 (MQ=255)                            atcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGagag                                                                                                                          >  2:1054314/1‑150 (MQ=255)                             tcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTGGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCAAGTGCCACTGGTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAgg                                                                                                                         >  2:842418/1‑150 (MQ=255)                              catcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGc                                                                                                                        <  2:175446/150‑1 (MQ=255)                              catcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACAATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGc                                                                                                                        <  2:1702875/150‑1 (MQ=255)                                tcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCt                                                                                                                      >  2:1246021/1‑150 (MQ=255)                                tcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCt                                                                                                                      >  2:203488/1‑150 (MQ=255)                                  gACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGGGATCGGGGGATCGGGAGAGGCCTgg                                                                                                                    >  2:1901249/1‑150 (MQ=255)                                     tCCACCTGCACCAACTGGTCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                                                                       <  1:670591/128‑1 (MQ=255)                                     tCCACCTGCACCAACTGGTCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                                                                       >  2:670591/1‑128 (MQ=255)                                      ccACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCa                                                                                                                <  1:1729316/150‑1 (MQ=255)                                       cACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCAt                                                                                                               <  1:1054314/150‑1 (MQ=255)                                        aCCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                                                                 >  1:1706970/1‑115 (MQ=255)                                        aCCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                                                                 <  2:1706970/115‑1 (MQ=255)                                        aCCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCCTg                                                                                                              <  2:1295717/150‑1 (MQ=255)                                             cACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCgg                                                                                                         <  1:963057/150‑1 (MQ=255)                                               ccAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCa                                                                                                       <  1:572224/150‑1 (MQ=255)                                                cAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                                                                               >  2:986561/1‑109 (MQ=255)                                                cAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                                                                               <  1:986561/109‑1 (MQ=255)                                                 aaCTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGt                                                                                                                                             >  2:697228/1‑110 (MQ=255)                                                 aaCTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGt                                                                                                                                             <  1:697228/110‑1 (MQ=255)                                                 aaCTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGt                                                                                                     <  1:203488/150‑1 (MQ=255)                                                     ggCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAg                                                                                                 <  2:1080292/150‑1 (MQ=255)                                                      gCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGc                                                                                                >  2:1780815/1‑150 (MQ=255)                                                        cGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCt                                                                                              >  2:561940/1‑150 (MQ=255)                                                            ggCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCTGCAGTCTAGCCTGCCa                                                                                          <  1:1246021/150‑1 (MQ=255)                                                             gCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCTGGCAGGCTAGACTGccgg                                                                                         <  2:276536/150‑3 (MQ=255)                                                             gCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGAAGCGCGCCCATTGCGAGGCTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAg                                                                                         <  1:237581/150‑1 (MQ=255)                                                              cAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                                                                       <  2:1707458/103‑1 (MQ=255)                                                              cAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                                                                       >  1:1707458/1‑103 (MQ=255)                                                               aGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGc                                                                                       <  1:1780815/150‑1 (MQ=255)                                                                 cGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGAGGTAAGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAgatcg                                                                                     >  1:990964/1‑146 (MQ=255)                                                                   gCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGccc                                                                                                                      <  2:966252/115‑2 (MQ=255)                                                                   gCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGccc                                                                                                                      >  1:966252/1‑114 (MQ=255)                                                                    ccACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCCCGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTaaacg                                                                                                                                        >  2:1254150/1‑93 (MQ=255)                                                                    ccACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAACg                                                                                                                                        <  1:1254150/96‑1 (MQ=255)                                                                     cacaTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGccc                                                                                 <  1:1178958/150‑1 (MQ=255)                                                                      acaTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCcg                                                                                >  2:888152/1‑150 (MQ=255)                                                                        aTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                                                                               >  2:1100065/1‑85 (MQ=255)                                                                        aTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                                                                               <  1:1100065/85‑1 (MQ=255)                                                                         tcagccAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCgcgc                                                                             >  1:1542936/5‑150 (MQ=255)                                                                            tCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGcaca                                                                          <  1:1580471/150‑1 (MQ=255)                                                                               aGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGcc                                                                       <  2:1542936/150‑1 (MQ=255)                                                                                    cTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTg                                                                  >  1:922548/1‑150 (MQ=255)                                                                                    cTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTg                                                                  >  1:1329815/1‑150 (MQ=255)                                                                                     tCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTgc                                                                 >  1:1516383/1‑150 (MQ=255)                                                                                         gggTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCa                                                             >  2:1396099/1‑150 (MQ=255)                                                                                         cccgcttaccctcacaatGGGCGCGCTGCAGCAGTGGCACGTGGC‑‑‑GTTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCa                                                             <  1:258868‑M1/132‑1 (MQ=255)                                                                                                aCCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCAt                                                      >  2:1054698/1‑150 (MQ=255)                                                                                                  cATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                                                                           <  1:869668/79‑1 (MQ=255)                                                                                                  cATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                                                                           >  2:869668/1‑79 (MQ=255)                                                                                                       tcacaatgggcgcgctgcagcagtggcacgtggcgttgcagcgcgcccATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGc                                                  <  2:258868‑M2/102‑1 (MQ=255)                                                                                                               GCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCTGGCAGGCTAGACTGCCGggcatga                                                                                   >  2:1941586‑M1/1‑103 (MQ=255)                                                                                                               GCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCTGGCAGGCTAGACTGCCGggcatga                                                                                   <  1:1941586‑M1/106‑4 (MQ=255)                                                                                                                  gcgctgcagcagtggcacgtggcgttgcagcgcgcccATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCAt                                                                                                               <  1:459928‑M2/41‑1 (MQ=255)                                                                                                                  gcgctgcagcagtggcacgtggcgttgcagcgcgcccATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCAt                                                                                                               >  2:459928‑M2/38‑78 (MQ=255)                                                                                                                     CAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAgc                                 >  2:1516383‑M1/1‑150 (MQ=255)                                                                                                                        cagcagtggcacgtggcgttgcagcgcgcccATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAgc                                 >  1:1625383‑M2/32‑150 (MQ=255)                                                                                                                        c‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGcc                              <  2:1329815/150‑1 (MQ=255)                                                                                                                             ccACGTGCCACTGTTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGt                            >  1:15095/1‑150 (MQ=255)                                                                                                                             ccACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCCCACAAACTTTTGCGCCAGGTTCATCGGCCTTGGCACAGGCCAAGCGCCGt                            <  1:1901249/150‑1 (MQ=255)                                                                                                                               aCGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTg                                              >  2:1561968/1‑130 (MQ=255)                                                                                                                               aCGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTg                                              <  1:1561968/130‑1 (MQ=255)                                                                                                                                   gCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTc                      >  2:761727/1‑150 (MQ=255)                                                                                                                                      aCTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCAcg                   >  1:1115718/1‑150 (MQ=255)                                                                                                                                      aCTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCAcg                   >  1:672530/1‑150 (MQ=255)                                                                                                                                          ctgcAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCAcgcgcg               <  1:761727/150‑1 (MQ=255)                                                                                                                                            gcagcgcgcccATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGt             >  2:476643‑M2/12‑150 (MQ=255)                                                                                                                                                 gcgcccATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCaa        <  1:1396099‑M2/144‑1 (MQ=255)                                                                                                                                                 gcgcccATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCaa        <  1:1054698‑M2/144‑1 (MQ=255)                                                                                                                                                     ccATTGTGAGGGTAAGCGGGGTATCGGGAGGGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAatgat    >  1:1724341‑M2/3‑150 (MQ=255)                                                                                                                                                     ccATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAat       <  2:1704604‑M2/145‑1 (MQ=255)                                                                                                                                                     ccATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAat       >  1:1704604‑M2/3‑147 (MQ=255)                                                                                                                                                      cATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGTGCCAGGTTCATCGGCCTTg                                              >  2:1034515‑M2/2‑107 (MQ=255)                                                                                                                                                      cATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGTGCCAGGTTCATCGGCCTTg                                              <  1:1034515‑M2/106‑1 (MQ=255)                                                                                                                                                       aTTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAATGATGc  >  1:1211834/1‑150 (MQ=255)                                                                                                                                                       |                                                                                                                                                      GCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAATGATGC  >  NC_002947/4240089‑4240385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.