New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4240206	72 (0.990)	5 (0.080)	4/224	NT	7.2%	coding (128/900 nt)	PP_3717	LuxR family transcriptional regulator
	?	NC_002947	= 4240223	63 (0.960)					coding (111/900 nt)	PP_3717	LuxR family transcriptional regulator

GGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGC  >  NC_002947/4240059‑4240354                                                                                                                                                    |                                                                                                                                                        gggATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAc                                                                                                                                                       <  1:1209735/150‑1 (MQ=255)      gCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCAc                                                                                                                                               <  2:837031/150‑1 (MQ=255)        cTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGt                                                                                                                                             <  1:1137994/150‑1 (MQ=255)         ttGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTg                                                                                                                                            >  1:187644/1‑150 (MQ=255)         ttGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGCGTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGt                                                                                                                                             >  2:459978/1‑149 (MQ=255)         ttGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGCATTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGt                                                                                                                                             <  1:459978/149‑1 (MQ=255)              ggTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCAct                                                                                                                                       >  2:1104884/1‑150 (MQ=255)               gTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCActg                                                                                                                                      <  2:656989/150‑1 (MQ=255)                  gcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCAAC‑‑‑GCCACGTGCCActgctg                                                                                                                                   >  1:1625383‑M1/120‑150 (MQ=255)                  cAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAgcagtggcacgtggcgttg                                                                                                                                      <  2:1015842‑M1/150‑20 (MQ=255)                      aaCTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCtgcagc                                                                                                                               >  2:867018‑M2/1‑144 (MQ=255)                               gcccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCAtt                                                                                                                      <  1:1104884/150‑1 (MQ=255)                               gcccgcccCTGGAACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCAtt                                                                                                                      <  2:1764373/150‑1 (MQ=255)                                cccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGc                                                                                                                                           >  1:898995/1‑128 (MQ=255)                                cccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGc                                                                                                                                           <  2:898995/128‑1 (MQ=255)                                 ccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCActgc                                                                                                                                     <  2:1679108/133‑1 (MQ=255)                                 ccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCActgc                                                                                                                                     >  1:1679108/1‑133 (MQ=255)                                 ccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATtgt                                                                                                                    <  2:459880/150‑1 (MQ=255)                                 ccgcccCTGGCACTCAAGGCTGAGCATCATCGACTCCACCGGCACCAACTGGCCGATGGCAGCGGCCACCTACTCCAGCGTCTCGGGGGTTCCACCATGGGCCAGGGCGCCCTGCAAC‑‑‑GCCACGTACCACTGCTGCAGCGCGCCCATtgt                                                                                                                    <  1:730439/150‑1 (MQ=255)                                   gccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                                  <  2:258868‑M1/48‑1 (MQ=255)                                   gcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAgcagtggcacgtggcgttgcagcgcgccctggccca                                                                                                                     >  2:1097278‑M1/1‑114 (MQ=255)                                   gcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                                  >  2:1580471/1‑150 (MQ=255)                                    ccccTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAg                                                                                                                 <  1:277295/150‑1 (MQ=255)                                     cccTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                                                <  2:62280/150‑1 (MQ=255)                                            aCTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAGCAGTGGCACGTGGC‑‑‑GTtgcagcgcgccctggcccatggtgaaac                                                                                                         >  1:1097278‑M2/1‑122 (MQ=255)                                             cTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCAGAAACAGGCTGCAGCACGGCTTGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGTCCATTGTGAGGGTAAGCgg                                                                                                        <  1:1198520/150‑1 (MQ=255)                                                    cTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCg                                                                                                 <  2:1785820/150‑1 (MQ=255)                                                       atcatcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGga                                                                                              >  2:1178958/1‑150 (MQ=255)                                                         catcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                                            <  1:500632/150‑1 (MQ=255)                                                         catcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                                            >  1:1080292/1‑150 (MQ=255)                                                          atcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGagag                                                                                           >  2:1054314/1‑150 (MQ=255)                                                           tcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTGGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCAAGTGCCACTGGTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAgg                                                                                          >  2:842418/1‑150 (MQ=255)                                                            catcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGc                                                                                         <  2:175446/150‑1 (MQ=255)                                                            catcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACAATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGc                                                                                         <  2:1702875/150‑1 (MQ=255)                                                              tcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCt                                                                                       >  2:203488/1‑150 (MQ=255)                                                              tcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCt                                                                                       >  2:1246021/1‑150 (MQ=255)                                                                gACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGGGATCGGGGGATCGGGAGAGGCCTgg                                                                                     >  2:1901249/1‑150 (MQ=255)                                                                   tCCACCTGCACCAACTGGTCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                                        <  1:670591/128‑1 (MQ=255)                                                                   tCCACCTGCACCAACTGGTCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                                        >  2:670591/1‑128 (MQ=255)                                                                    ccACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCa                                                                                 <  1:1729316/150‑1 (MQ=255)                                                                     cACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCAt                                                                                <  1:1054314/150‑1 (MQ=255)                                                                      aCCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                                  >  1:1706970/1‑115 (MQ=255)                                                                      aCCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                                  <  2:1706970/115‑1 (MQ=255)                                                                      aCCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCCTg                                                                               <  2:1295717/150‑1 (MQ=255)                                                                           cACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCgg                                                                          <  1:963057/150‑1 (MQ=255)                                                                             ccAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCa                                                                        <  1:572224/150‑1 (MQ=255)                                                                              cAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                                                >  2:986561/1‑109 (MQ=255)                                                                              cAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                                                <  1:986561/109‑1 (MQ=255)                                                                               aaCTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGt                                                                                                              <  1:697228/110‑1 (MQ=255)                                                                               aaCTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGt                                                                                                              >  2:697228/1‑110 (MQ=255)                                                                               aaCTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGt                                                                      <  1:203488/150‑1 (MQ=255)                                                                                   ggCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAg                                                                  <  2:1080292/150‑1 (MQ=255)                                                                                    gCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGc                                                                 >  2:1780815/1‑150 (MQ=255)                                                                                      cGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCt                                                               >  2:561940/1‑150 (MQ=255)                                                                                          ggCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCTGCAGTCTAGCCTGCCa                                                           <  1:1246021/150‑1 (MQ=255)                                                                                           gCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCTGGCAGGCTAGACTGccgg                                                          <  2:276536/150‑3 (MQ=255)                                                                                           gCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGAAGCGCGCCCATTGCGAGGCTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAg                                                          <  1:237581/150‑1 (MQ=255)                                                                                            cAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                                        >  1:1707458/1‑103 (MQ=255)                                                                                            cAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                                        <  2:1707458/103‑1 (MQ=255)                                                                                             aGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGc                                                        <  1:1780815/150‑1 (MQ=255)                                                                                               cGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGAGGTAAGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAgatcg                                                      >  1:990964/1‑146 (MQ=255)                                                                                                atgacccaggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAgcgc                                                                                                                             <  1:459928‑M1/37‑1 (MQ=255)                                                                                                atgacccaggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAgcgc                                                                                                                             >  2:459928‑M1/42‑78 (MQ=255)                                                                                                 gCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGccc                                                                                       >  1:966252/1‑114 (MQ=255)                                                                                                 gCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGccc                                                                                       <  2:966252/115‑2 (MQ=255)                                                                                                  ccACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCCCGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTaaacg                                                                                                         >  2:1254150/1‑93 (MQ=255)                                                                                                  ccACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAACg                                                                                                         <  1:1254150/96‑1 (MQ=255)                                                                                                   cacaTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGccc                                                  <  1:1178958/150‑1 (MQ=255)                                                                                                    acaTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCcg                                                 >  2:888152/1‑150 (MQ=255)                                                                                                      aTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                                                >  2:1100065/1‑85 (MQ=255)                                                                                                      aTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAgg                                                                                                                <  1:1100065/85‑1 (MQ=255)                                                                                                       tcagccAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCgcgc                                              >  1:1542936/5‑150 (MQ=255)                                                                                                        aCTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAgcagtggcacgtggcgttg                                                                                                                                      <  2:537462‑M1/64‑20 (MQ=255)                                                                                                        aCTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAgcagtggcacgtggcgttg                                                                                                                                      >  1:537462‑M1/1‑45 (MQ=255)                                                                                                          tCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGcaca                                           <  1:1580471/150‑1 (MQ=255)                                                                                                             aGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGcc                                        <  2:1542936/150‑1 (MQ=255)                                                                                                                  cTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTg                                   >  1:1329815/1‑150 (MQ=255)                                                                                                                  cTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTg                                   >  1:922548/1‑150 (MQ=255)                                                                                                                   tCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTgc                                  >  1:1516383/1‑150 (MQ=255)                                                                                                                       gggTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCa                              >  2:1396099/1‑150 (MQ=255)                                                                                                                       cccgcttaccctcacaatGGGCGCGCTGCAGCAGTGGCACGTGGC‑‑‑GTTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCa                              <  1:258868‑M1/132‑1 (MQ=255)                                                                                                                         gTTTCACCATGGGCCAGGGCGCGCTGCAacgccacgtgccactgctgcagcgcgccctggcccatggtgaaacccccgaggcgctggagtatgtggccgctgccatcggccagttggtgcaggtggagtcgatgatgatcagccttgagt                               >  1:1097278‑M1/1‑28 (MQ=255)                                                                                                                              aCCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCAt                       >  2:1054698/1‑150 (MQ=255)                                                                                                                                cATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                                            <  1:869668/79‑1 (MQ=255)                                                                                                                                cATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgaga                                                                                            >  2:869668/1‑79 (MQ=255)                                                                                                                                  tGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCtgcagcgcgccctggcccatggtgaaacccccgaggcgctggagtatgtggccgctgccatcggccagttggtgcaggtggagtcgatgatgatcagccttgagtgccaggggc                   >  2:1097278‑M2/1‑36 (MQ=255)                                                                                                                                             GCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCTGGCAGGCTAGACTGCCGggcatga                                                    >  2:1941586‑M1/1‑103 (MQ=255)                                                                                                                                             GCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCTGGCAGGCTAGACTGCCGggcatga                                                    <  1:1941586‑M1/106‑4 (MQ=255)                                                                                                                                               gcTGCAgcagtggcacgtggcgttgcagcgcgccctggcccatggtgaaacccccgaggcgctggagtatgtggccgctgccatcggccagttggtgcaggtggagtcgatgatgatcagccttgagtgccaggggcgggcgccgcagtt         >  2:867018‑M1/1‑6 (MQ=255)                                                                                                                                                   cAAC‑‑‑GCCACGTGCCACTGCtgcagcgcgccctggcccatggtgaaacccccgaggcgctggagtatgtggccgctgccatcggccagttggtgcaggtggagtcgatgatgatcagccttgagtgccaggggcgggcgccgcagttgctg  <  2:1015842‑M2/150‑132 (MQ=255)                                                                                                                                                   cAAC‑‑‑GCCACGTGCCACTGCtgcagcgcgccctggcccatggtgaaacccccgaggcgctggagt                                                                                        >  1:537462‑M2/1‑19 (MQ=255)                                                                                                                                                   cAAC‑‑‑GCCACGTGCCACTGCtgcagcgcgccctggcccatggtgaaacccccgaggcgctggagt                                                                                        <  2:537462‑M2/64‑46 (MQ=255)                                                                                                                                                   CAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAgc  >  2:1516383‑M1/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                        GGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAC‑‑‑GCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGC  >  NC_002947/4240059‑4240354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.