| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4611098 = | 76 (1.040) | 4 (0.060) | 6/234 | NT | 5.4% | intergenic (+14/‑2093) | hcpC‑II/PP_4084 | hemolysin‑coregulated protein/hypothetical protein |
| ? | NC_002947 | 4611123 = | 68 (0.990) | intergenic (+39/‑2068) | hcpC‑II/PP_4084 | hemolysin‑coregulated protein/hypothetical protein | |||||
TCCCCACGCACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGG > NC_002947/4610949‑4611247 | tCCCCACGCACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGcc > 1:1153994/1‑150 (MQ=39) ccaattcaaagggtgcgctgatgccctcgcggagttcgaacgacaccacttcgaattcagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcc < 2:1862173‑M1/2‑1 (MQ=255) caattcaaagggtgcgctgatgccctcgcggagttcgaacgacaccacttcgaattcagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagccc < 1:1881015‑M1/3‑1 (MQ=255) ccACGCACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGAGTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑g > 1:617880/1‑150 (MQ=38) cACGCACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑gg < 2:1730682/150‑1 (MQ=39) ttcaaagggtgcgctgacgccctcgcgaagttcgaacgacaccacttcgaattcagctttgtcaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagCCC‑ggg > 2:718966‑M1/145‑150 (MQ=255) gCACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCa < 2:53243/150‑1 (MQ=38) cACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAg < 1:631152/150‑1 (MQ=39) aCAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGTCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATg > 2:837154/1‑150 (MQ=255) aCAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATg > 1:531875/1‑150 (MQ=39) cAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATg‑c > 2:1136374/1‑150 (MQ=39) gACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTTCCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCTCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATg‑ccc‑gc < 1:1556623/150‑1 (MQ=255) aTGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCgg > 1:1729155/1‑150 (MQ=38) tGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCggg > 2:1919380/1‑150 (MQ=38) aaaCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCtt > 2:574425/1‑150 (MQ=39) aaCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCttt < 1:1271213/150‑1 (MQ=38) aaCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCttt < 2:863464/150‑1 (MQ=39) tACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTtgtg > 1:881862/1‑150 (MQ=39) acacCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTgtgt < 1:1315379/150‑1 (MQ=39) cccAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGa < 2:1737332/150‑1 (MQ=39) ccAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGAt > 1:749068/1‑150 (MQ=38) cAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGAtt < 2:531875/150‑1 (MQ=38) gCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCa > 1:237532/1‑150 (MQ=35) gacaccacttcgaattcagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgcctgacccgtgcaaatgCCCCGGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGa < 1:1261816‑M1/43‑1 (MQ=255) tGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGAaggc < 2:617880/150‑1 (MQ=25) gAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGAtt < 2:1243623/141‑1 (MQ=35) gAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGAtt > 1:1243623/1‑141 (MQ=35) gAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGAcggcg < 2:1153994/150‑1 (MQ=35) aGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGa < 2:237532/150‑1 (MQ=35) ttATCGCTGGCGCATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGAc < 1:194377/149‑1 (MQ=25) aTCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACaa < 1:1136374/150‑1 (MQ=35) cgaattcagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgcctgacccgtgcaaatgCCCCGGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACaa > 2:1261816‑M1/98‑150 (MQ=255) tATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTa < 1:595675/150‑1 (MQ=34) cgatctaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCA‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTAt < 2:1827446/144‑1 (MQ=255) aTCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTAt < 2:1729155/150‑1 (MQ=35) gAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGcc > 2:627591/1‑150 (MQ=35) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCTCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCt > 2:1364524/1‑150 (MQ=25) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCt > 2:946600/1‑150 (MQ=35) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCt < 1:742648/150‑1 (MQ=35) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCt > 2:742648/1‑150 (MQ=35) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCt > 1:831472/1‑150 (MQ=35) aTCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGcccc < 1:1239457/82‑1 (MQ=40) aTCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGcccc > 2:1239457/1‑82 (MQ=40) tCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCa > 2:1110020/1‑150 (MQ=35) aCGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAAt < 1:1174871/150‑1 (MQ=35) ggCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAt < 2:749068/150‑1 (MQ=35) gCTCACGATTTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAtt < 1:574425/150‑1 (MQ=25) cTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGAcggc < 1:124451/115‑1 (MQ=38) cTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGAcggc > 2:124451/1‑115 (MQ=38) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTg > 1:1105258/1‑150 (MQ=35) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgcg < 1:946600/150‑1 (MQ=34) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgc > 2:998929/1‑149 (MQ=35) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgc < 1:998929/149‑1 (MQ=35) cGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgcgc < 1:627591/150‑1 (MQ=34) gatctcAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCTGAGCCAATCTGATTTGCGCTACa < 1:1232343/145‑1 (MQ=255) aGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCACATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCCTTGTGCTGCTTCAGCCCGCGGCCACCGACCCTCTATCCCTAGCCAATCTCATTCGCGCtcccgc > 2:1853586/1‑145 (MQ=11) gCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCt > 1:788566/1‑150 (MQ=34) aaTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGAGGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAgagatc > 2:1232343/1‑145 (MQ=255) aTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGa < 2:1105258/150‑1 (MQ=34) aTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGa < 2:881862/150‑1 (MQ=34) cGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCa > 2:238720/1‑150 (MQ=32) ggCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCg > 1:471568/1‑150 (MQ=32) tctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCTCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg < 1:1364524/150‑1 (MQ=17) tctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg < 2:213995/150‑1 (MQ=32) ctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTgg < 1:1919380/150‑1 (MQ=32) cTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCt < 2:788566/150‑1 (MQ=32) tGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCAc < 2:776103/135‑1 (MQ=33) tGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCAc > 1:776103/1‑135 (MQ=33) gcgcgcACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGcc > 2:537928/1‑44 (MQ=40) gcgcgcACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGcc < 1:537928/44‑1 (MQ=40) ccgccgCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg > 1:1464940/1‑131 (MQ=33) ccgccgCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg < 2:1464940/131‑1 (MQ=33) ccgccgCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAgt > 2:1881015/1‑150 (MQ=35) gccTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAt > 1:641320/1‑98 (MQ=33) gccTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAt < 2:641320/98‑1 (MQ=34) tctgaatcaacacaaagCCC‑GGGCGGGCATGG‑CCT‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAg < 2:795924‑M1/113‑1 (MQ=255) tctgaatcaacacaaagCCC‑GGGCGGGC‑ATG‑GCCTGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAg > 1:795924‑M1/18‑130 (MQ=255) cTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAgg > 1:1204881/1‑115 (MQ=33) cTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAgg < 2:1204881/115‑1 (MQ=33) gACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGtt > 1:1862173/1‑150 (MQ=34) ccGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTgg < 1:560763/120‑1 (MQ=31) ccGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTgg > 2:560763/1‑120 (MQ=31) ccGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAAtt < 1:1931514/132‑1 (MQ=33) ccGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAAtt > 2:1931514/1‑132 (MQ=34) cGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAgtg > 2:1140665/1‑138 (MQ=33) cGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAgtg < 1:1140665/138‑1 (MQ=33) gTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGaa < 1:1755583/134‑1 (MQ=33) gTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGaa > 2:1755583/1‑134 (MQ=33) aaTGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCcgc > 2:430361/1‑150 (MQ=32) aaagCCC‑GGGCGGGC‑ATG‑GCCTGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAgg > 2:1339916‑M1/5‑102 (MQ=255) aaagCCC‑GGGC‑GGGCATGGCCT‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGCATTCGAAGTGGTGTCGTTCGAACTCcgcg < 2:451834‑M1/146‑1 (MQ=255) aaagCCC‑GGGC‑GGGCATG‑GCCTGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAgg < 1:1339916‑M1/98‑1 (MQ=255) gCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGTCAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTg > 1:797863‑M1/2‑117 (MQ=255) gCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTg < 2:797863‑M1/116‑1 (MQ=255) cccc‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAgg < 1:238720/150‑1 (MQ=32) CCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGCTCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAggg < 2:218062‑M1/150‑1 (MQ=255) | TCCCCACGCACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGG > NC_002947/4610949‑4611247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |