| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4611098 = | 76 (1.040) | 4 (0.060) | 6/234 | NT | 5.4% | intergenic (+14/‑2093) | hcpC‑II/PP_4084 | hemolysin‑coregulated protein/hypothetical protein |
| ? | NC_002947 | 4611123 = | 68 (0.990) | intergenic (+39/‑2068) | hcpC‑II/PP_4084 | hemolysin‑coregulated protein/hypothetical protein | |||||
AAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCTTTGAATTGG > NC_002947/4610976‑4611270 | aaaCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑tt > 2:574425/1‑150 (MQ=39) aaCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑ttt < 2:863464/150‑1 (MQ=39) aaCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑ttt < 1:1271213/150‑1 (MQ=38) tACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTtgtg > 1:881862/1‑150 (MQ=39) cgcggagttcgaacgacaccacttcgaatgcagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcaggccatgcccgcccgggC‑ttt < 2:451834‑M2/4‑1 (MQ=255) acacCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTgtgt < 1:1315379/150‑1 (MQ=39) cccAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGa < 2:1737332/150‑1 (MQ=39) ccAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGAt > 1:749068/1‑150 (MQ=38) cAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGAtt < 2:531875/150‑1 (MQ=38) gCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCa > 1:237532/1‑150 (MQ=35) gacaccacttcgaattcagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgcctgacccgtgcaaatgCCCCGGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGa < 1:1261816‑M1/43‑1 (MQ=255) tGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGAaggc < 2:617880/150‑1 (MQ=25) gAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGAtt < 2:1243623/141‑1 (MQ=35) gAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGAtt > 1:1243623/1‑141 (MQ=35) gAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGAcggcg < 2:1153994/150‑1 (MQ=35) aGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGa < 2:237532/150‑1 (MQ=35) ttATCGCTGGCGCATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGAc < 1:194377/149‑1 (MQ=25) aTCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACaa < 1:1136374/150‑1 (MQ=35) cgaattcagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgcctgacccgtgcaaatgCCCCGGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACaa > 2:1261816‑M1/98‑150 (MQ=255) tATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTa < 1:595675/150‑1 (MQ=34) cagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcgggcatggcctgcccgggc < 2:797863‑M2/1‑1 (MQ=255) cagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgaccgccgtctgaatcaacacaaagcccgggcgggcatggcctgcccgggc > 1:797863‑M2/117‑117 (MQ=255) cgatctaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCA‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTAt < 2:1827446/144‑1 (MQ=255) aTCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTAt < 2:1729155/150‑1 (MQ=35) ctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcaggccatgcccgcccgggC‑TTTGTGTTGATTCAGa < 2:795924‑M2/17‑1 (MQ=255) ctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcaggccatgcccgcccgggC‑TTTGTGTTGATTCAGa > 1:795924‑M2/114‑130 (MQ=255) gAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGcc > 2:627591/1‑150 (MQ=35) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCTCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCt > 2:1364524/1‑150 (MQ=25) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCt > 2:742648/1‑150 (MQ=35) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCt > 2:946600/1‑150 (MQ=35) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCt > 1:831472/1‑150 (MQ=35) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCt < 1:742648/150‑1 (MQ=35) tCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCa > 2:1110020/1‑150 (MQ=35) aCGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAAt < 1:1174871/150‑1 (MQ=35) ggCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAt < 2:749068/150‑1 (MQ=35) gCTCACGATTTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAtt < 1:574425/150‑1 (MQ=25) cctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcaggccatgcccgcccgggC‑ttt < 1:1339916‑M2/4‑1 (MQ=255) cctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcaggccatgcccgcccgggC‑ttt > 2:1339916‑M2/99‑102 (MQ=255) cTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGAcggc < 1:124451/115‑1 (MQ=38) cTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGAcggc > 2:124451/1‑115 (MQ=38) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTg > 1:1105258/1‑150 (MQ=35) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgcg < 1:946600/150‑1 (MQ=34) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgc > 2:998929/1‑149 (MQ=35) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgc < 1:998929/149‑1 (MQ=35) cGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgcgc < 1:627591/150‑1 (MQ=34) gatctcAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCTGAGCCAATCTGATTTGCGCTACa < 1:1232343/145‑1 (MQ=255) aGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCACATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑CTTGTGCTGCTTCAGCCCGCGGCCACCGACCCTCTATCCCTAGCCAATCTCATTCGCGCtcccgc > 2:1853586/1‑145 (MQ=11) gCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCt > 1:788566/1‑150 (MQ=34) aaTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGAGGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAgagatc > 2:1232343/1‑145 (MQ=255) aTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGa < 2:1105258/150‑1 (MQ=34) aTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGa < 2:881862/150‑1 (MQ=34) cGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCa > 2:238720/1‑150 (MQ=32) ggCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCg > 1:471568/1‑150 (MQ=32) tctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCTCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg < 1:1364524/150‑1 (MQ=17) tctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg < 2:213995/150‑1 (MQ=32) ctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTgg < 1:1919380/150‑1 (MQ=32) cTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCt < 2:788566/150‑1 (MQ=32) tGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCAc < 2:776103/135‑1 (MQ=33) tGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCAc > 1:776103/1‑135 (MQ=33) ttgtccgccgtctgaatcaacacaaagcccgggcgggcatggcctgcccggggCATTTG‑CACGGGTCAGGCGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCg > 2:1261816‑M2/54‑150 (MQ=255) ccgccgCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg > 1:1464940/1‑131 (MQ=33) ccgccgCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg < 2:1464940/131‑1 (MQ=33) ccgccgCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAgt > 2:1881015/1‑150 (MQ=35) gccTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAt < 2:641320/98‑1 (MQ=34) gccTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAt > 1:641320/1‑98 (MQ=33) tctgaatcaacacaaagCCC‑GGGCGGGCATGG‑CCT‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAg < 2:795924‑M1/113‑1 (MQ=255) tctgaatcaacacaaagCCC‑GGGCGGGC‑ATG‑GCCTGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAg > 1:795924‑M1/18‑130 (MQ=255) cTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAgg > 1:1204881/1‑115 (MQ=33) cTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAgg < 2:1204881/115‑1 (MQ=33) tctgaatcaacacaaagcccgggcgggcatggcctgcccggggCATTTG‑CACGGGTCAGGCGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTc < 1:1261816‑M2/107‑1 (MQ=255) gACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGtt > 1:1862173/1‑150 (MQ=34) ccGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTgg < 1:560763/120‑1 (MQ=31) ccGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTgg > 2:560763/1‑120 (MQ=31) ccGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAAtt > 2:1931514/1‑132 (MQ=34) ccGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAAtt < 1:1931514/132‑1 (MQ=33) cGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAgtg < 1:1140665/138‑1 (MQ=33) cGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAgtg > 2:1140665/1‑138 (MQ=33) gTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGaa > 2:1755583/1‑134 (MQ=33) gTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGaa < 1:1755583/134‑1 (MQ=33) aaTGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCcgc > 2:430361/1‑150 (MQ=32) aaagCCC‑GGGCGGGC‑ATG‑GCCTGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAgg > 2:1339916‑M1/5‑102 (MQ=255) aaagCCC‑GGGC‑GGGCATGGCCT‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGCATTCGAAGTGGTGTCGTTCGAACTCcgcg < 2:451834‑M1/146‑1 (MQ=255) aaagCCC‑GGGC‑GGGCATG‑GCCTGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAgg < 1:1339916‑M1/98‑1 (MQ=255) gCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGTCAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTg > 1:797863‑M1/2‑117 (MQ=255) gCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTg < 2:797863‑M1/116‑1 (MQ=255) cccc‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAgg < 1:238720/150‑1 (MQ=32) CCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGCTCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAggg < 2:218062‑M1/150‑1 (MQ=255) CC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGc < 2:1076396‑M1/150‑1 (MQ=255) C‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCa < 2:251730‑M1/150‑1 (MQ=255) GGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTATAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATc < 1:936670‑M1/150‑1 (MQ=255) GCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCa > 2:831472‑M1/1‑150 (MQ=255) gCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAgcgc > 1:602684/1‑150 (MQ=32) gCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAgcgc > 1:1881855/1‑150 (MQ=32) cATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACCGCGTTGATGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCAc > 1:1577031/1‑150 (MQ=12) cc‑gcccgGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCttt > 1:1445011/1‑150 (MQ=32) cccgggC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGACAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTTCGCGAGGGCGTCAGCGCACCCTTTGaa > 2:718966‑M2/7‑150 (MQ=255) gggC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCTTTGAATTg < 1:1881015‑M2/147‑1 (MQ=255) ggC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCTTTGAATTgg < 2:1862173‑M2/148‑1 (MQ=255) | AAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCC‑GGGCAGGCCATG‑CCC‑GCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCTTTGAATTGG > NC_002947/4610976‑4611270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |