New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4675529 =	69 (0.950)	4 (0.060)	4/234	NT	5.8%	coding (483/561 nt)	chrR	chromate reductase
	?	NC_002947	4675557 =	64 (0.930)					coding (455/561 nt)	chrR	chromate reductase

TTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGCCACCAATCGCCCCCGGCGACACACTCAC  >  NC_002947/4675381‑4675675                                                                                                                                                     |                                                                                                                                                   ttGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa                                                                                                                                                   >  2:1109978/1‑150 (MQ=255) ttGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTAAACCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa                                                                                                                                                   >  1:436670/1‑150 (MQ=255)   gAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGc                                                                                                                                                 <  2:1404715/150‑1 (MQ=255)    cctggagcggcaagccgacggcggtggtgagtgtgtcgccgggggcgattggtggctttggcgccaaccatgcggtgcgccagtcgctggtgtttctcgacatgccctgcatgcagatgcccgaggcttaccttggcggtgcggcGAGCt                                                                                                                                                <  2:1276893‑M1/5‑1 (MQ=255)     attcaatgACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCtt                                                                                                                                               <  1:763413/143‑1 (MQ=255)           cGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGa                                                                                                                                         >  1:259306/1‑150 (MQ=255)                 aTTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTc                                                                                                                                   <  1:1234655/150‑1 (MQ=255)                  ttCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCg                                                                                                                                  >  2:161198/1‑150 (MQ=255)                    cgcgGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGaa                                                                                                                                <  2:589079/150‑1 (MQ=255)                        ggTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAg                                                                                                                            >  2:361294/1‑150 (MQ=255)                              cccGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAg                                                                                                                                                  <  1:1913972/122‑1 (MQ=255)                              cccGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAg                                                                                                                                                  >  2:1913972/1‑122 (MQ=255)                               ccGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCCACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAACCCTCGAACAAGCTcgccg                                                                                                                     >  2:223891/1‑150 (MQ=255)                                  cTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCaa                                                                                                                  <  2:1328062/150‑2 (MQ=255)                                     cTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGc                                                                                                               >  2:270738/1‑150 (MQ=255)                                     cTACACAGGAGCGTTGCACACCGGGCTTAGTGGATCAGACAGCCATGTTCAACTTCACCCATGACGCAAACCTGTCAACAAACGACTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTACCCGAATCCTCGAACCGGCTCGCCGCACCGc                                                                                                               >  2:490667/1‑150 (MQ=255)                                        cacaGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGGCAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCaa                                                                                                            <  1:608459/150‑1 (MQ=255)                                         acaGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAg                                                                                                           <  1:270738/150‑1 (MQ=255)                                          caGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAgg                                                                                                          >  2:1116599/1‑150 (MQ=255)                                             gggCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGTCGCACCGCCAAGGTaa                                                                                                       <  1:214485/150‑1 (MQ=255)                                             gggCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTaa                                                                                                       >  1:1408635/1‑150 (MQ=255)                                                 gTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTcg                                                                                                                        <  1:1563096/129‑1 (MQ=255)                                                 gTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTcg                                                                                                                        >  2:1563096/1‑129 (MQ=255)                                                 gTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCt                                                                                                   <  1:1705625/150‑1 (MQ=255)                                                 gTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGCCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCt                                                                                                   >  2:1440969/1‑150 (MQ=255)                                                 gTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGAAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCt                                                                                                   >  1:215606/1‑150 (MQ=255)                                                  ttGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAACCCTGAAACAAGCTCGCCGCACCGCCAAGGTAAGCCTc                                                                                                  <  1:1341152/150‑1 (MQ=255)                                                     cacaGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCggg                                                                                               <  2:1656364/150‑1 (MQ=255)                                                      acaGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGc                                                                                              >  1:850878/1‑150 (MQ=255)                                                        tggctttggcgccaaccatgcggtgcgccagtcgctggtgtttctcgacatgccctgcatgcagatgcccgaggcttaccttggcggtgcggcGAGCtt                                                                                                                                               >  1:1883260‑M1/94‑99 (MQ=255)                                                        tggctttggcgccaaccatgcggtgcgccagtcgctggtgtttctcgacatgccctgcatgcagatgcccgaggcttaccttggcggtgcggcGAGCtt                                                                                                                                               <  2:1883260‑M1/6‑1 (MQ=255)                                                        agcagGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACaa                                                                                                                             >  2:1591506/1‑117 (MQ=255)                                                        agcagGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACaa                                                                                                                             <  1:1591506/117‑1 (MQ=255)                                                         gcagGATTAGGGGTTCAGTCCGCCATGGTCAACTTCACCCATGACGTAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGATCAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATc                                                                                           <  2:146358/150‑1 (MQ=255)                                                          cagGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAACTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCt                                                                                          >  1:805085/1‑150 (MQ=255)                                                           agGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCtg                                                                                         >  2:389103/1‑150 (MQ=255)                                                             gATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCtgca                                                                                       <  2:850878/150‑1 (MQ=255)                                                               ttAGGGGTTCAGACCGCCCTGTTCAACTTCAGCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCtgcatg                                                                                     >  1:533540/1‑150 (MQ=255)                                                               ttAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCtgcatg                                                                                     <  1:1109978/150‑1 (MQ=255)                                                                  ggggTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAg                                                                                  <  2:1408635/150‑1 (MQ=255)                                                                  ggggTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAg                                                                                  <  2:1750703/150‑1 (MQ=255)                                                                   gggTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAgg                                                                                 <  1:389103/150‑1 (MQ=255)                                                                   gggTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTAAACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAgg                                                                                 <  1:700366/150‑1 (MQ=255)                                                                      ttCAGACCGCCCTGTTCAACTTAACCCATGACGCAAACCTGTCGACAAAAAACTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCa                                                                              <  2:1909925/150‑1 (MQ=255)                                                                          gACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTc                                                                          <  1:490667/150‑1 (MQ=255)                                                                              gCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCgaga                                                                      <  2:1051236/150‑1 (MQ=255)                                                                                ccTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGaaa                                                                    <  1:361294/150‑1 (MQ=255)                                                                                   ccagtcgctggtgtttctcgacatgccctgcatgcagatgcccgaggcttaccttggcggtgcggcGAg                                                                                                                                                  >  2:396549‑M1/67‑69 (MQ=255)                                                                                   ccagtcgctggtgtttctcgacatgccctgcatgcagatgcccgaggcttaccttggcggtgcggcGAg                                                                                                                                                  <  1:396549‑M1/3‑1 (MQ=255)                                                                                    ttCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACAcc                                                                >  1:1746993/1‑150 (MQ=255)                                                                                     tCAACTTCACCCATGACGCAAACCTGCCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCa                                                               <  1:1440969/150‑1 (MQ=255)                                                                                      cAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCTTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAg                                                              >  1:1807092/1‑150 (MQ=255)                                                                                       aaCTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGc                                                             >  1:312131/1‑150 (MQ=255)                                                                                             aCCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAacac                                                                 <  2:62256/140‑1 (MQ=255)                                                                                             aCCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAacac                                                                 >  1:62256/1‑140 (MQ=255)                                                                                               ccATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGgcg                                                     >  2:1199452/1‑150 (MQ=255)                                                                                                    aCGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa                                                                                                                                                   >  2:1726483/1‑51 (MQ=255)                                                                                                    aCGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa                                                                                                                                                   <  1:1726483/51‑1 (MQ=255)                                                                                                        aaaCCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATg                                            <  1:161198/150‑1 (MQ=255)                                                                                                        aaaCCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATg                                            >  2:331313/1‑150 (MQ=255)                                                                                                             tGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTgg                                       <  2:259306/150‑1 (MQ=255)                                                                                                              gTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGgc                                      <  2:1746993/150‑1 (MQ=255)                                                                                                                 gACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGcc                                   >  1:1185642/1‑150 (MQ=255)                                                                                                                    aaaCGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCgg                                                                                                <  1:1196185/86‑1 (MQ=255)                                                                                                                    aaaCGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCgg                                                                                                >  2:1196185/1‑86 (MQ=255)                                                                                                                      agatgcccgaggcttaccttggcggtgcggcGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCCCCGCCAAGGTAAGCCTCGGGCATCt                                                                                          <  2:1786760‑M1/59‑1 (MQ=255)                                                                                                                      agatgcccgaggcttaccttggcggtgcggcGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCt                                                                                          >  1:1786760‑M1/32‑90 (MQ=255)                                                                                                                      aCGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCAcc                                                 <  2:927557/131‑1 (MQ=255)                                                                                                                      aCGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCAcc                                                 >  1:927557/1‑131 (MQ=255)                                                                                                                      aCGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGc                              <  1:1116599/150‑1 (MQ=255)                                                                                                                       cGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGcc                             <  2:6374/150‑1 (MQ=255)                                                                                                                         ccTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGccac                           <  2:436670/150‑1 (MQ=255)                                                                                                                           tGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGcca                            >  2:1427631/1‑147 (MQ=255)                                                                                                                           tGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGcca                            <  1:1427631/147‑1 (MQ=255)                                                                                                                             cAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGCCTGGCGCACCGCATGGTTGGCGCCAAAGCCACCAAt                       >  2:722056/1‑150 (MQ=255)                                                                                                                             cAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGCCACCAAt                       >  1:1276893/1‑150 (MQ=255)                                                                                                                               aGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAg                                                                                  <  2:874045/89‑1 (MQ=255)                                                                                                                               aGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAg                                                                                  >  1:874045/1‑89 (MQ=255)                                                                                                                                      tCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAacac                                                                 <  1:1274667/99‑1 (MQ=255)                                                                                                                                      tCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAacac                                                                 >  2:1274667/1‑99 (MQ=255)                                                                                                                                      tCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGCCACCAATCGCCCCCgg              <  2:1185642/150‑1 (MQ=255)                                                                                                                                       cttggcggtgcggcGAGCTTGTTCGAGGATTCGGGCAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGCCACCAATCGCCCCCgg              <  2:469336‑M1/135‑1 (MQ=255)                                                                                                                                       cttggcggtgcggcGAGCTTGTTCGAGGATTCGGGCAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGCCACCAATCGCCCCCgg              >  1:469336‑M1/15‑149 (MQ=255)                                                                                                                                        gcgTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAgg                                                                                                          <  1:1230443/56‑1 (MQ=255)                                                                                                                                        gcgTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAgg                                                                                                          >  2:1230443/1‑56 (MQ=255)                                                                                                                                                tCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCt                                                                                          >  1:1049540/1‑64 (MQ=255)                                                                                                                                                tCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCt                                                                                          <  2:1049540/64‑1 (MQ=255)                                                                                                                                                  aTTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGTATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGCCACCAATCGCCCCCGGCGACACACTcac  >  2:1751469/1‑150 (MQ=255)                                                                                                                                                  aTTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCga                                                                        <  1:1859503/80‑1 (MQ=255)                                                                                                                                                  aTTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCga                                                                        >  2:1859503/1‑80 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TTGAATTTGCCGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCGCACCGCCAAGGTAAGCCTCGGGCATCTGCATGCAGGGCATGTCGAGAAACACCAGCGACTGGCGCACCGCATGGTTGGCGCCAAAGCCACCAATCGCCCCCGGCGACACACTCAC  >  NC_002947/4675381‑4675675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.